RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 GABPB2Q8TAK5 448 aaPredicted RBP17.9■□□□□ 0.46
RTN4-204ENST00000357732 FAM45AQ8TCE6 357 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 PPP1R13LQ8WUF5 828 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 PPP1R36Q96LQ0 422 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 FCRL5Q96RD9 977 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 CDHR5Q9HBB8 845 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 SPAG4Q9NPE6 437 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 ADA2Q9NZK5 511 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 G3BP2Q9UN86 482 aaKnown RBP17.9■□□□□ 0.46
RTN4-204ENST00000357732 TCRBV3S1A0A5B6 114 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 JUNP05412 331 aaKnown RBP17.89■□□□□ 0.45
RTN4-204ENST00000357732 CDH2P19022 906 aaPredicted RBP17.89■□□□□ 0.45
RTN4-204ENST00000357732 CCNCP24863 283 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 LRPAP1P30533 357 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 CCR10P46092 362 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 NDUFV1P49821 464 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 ATP4BP51164 291 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 LRP8Q14114 963 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 ZNF792Q3KQV3 632 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 RAB41Q5JT25 222 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 TSTD2Q5T7W7 516 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 IYDQ6PHW0 289 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 CARM1Q86X55 608 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 TSPAN14Q8NG11 270 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 HM13Q8TCT9 377 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 PBXIP1Q96AQ6 731 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 NPAS2Q99743 824 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 TBL1YQ9BQ87 522 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 SLC25A23Q9BV35 468 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 COLEC11Q9BWP8 271 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 FAM49AQ9H0Q0 323 aaPredicted RBP17.89■□□□□ 0.45
RTN4-204ENST00000357732 OCEL1Q9H607 264 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 PNPLA3Q9NST1 481 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 BEST1O76090 585 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 H6PDO95479 791 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 PGK1P00558 417 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 CCDC166P0CW27 439 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 HTR7P34969 479 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 ARCN1P48444 511 aaKnown RBP17.89■□□□□ 0.45
RTN4-204ENST00000357732 CXCR3P49682 368 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 HPCAP84074 193 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 ILF2Q12905 390 aaKnown RBP17.89■□□□□ 0.45
RTN4-204ENST00000357732 IKBKEQ14164 716 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 SAMD4BQ5PRF9 694 aaKnown RBP17.89■□□□□ 0.45
RTN4-204ENST00000357732 IL23RQ5VWK5 629 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 PM20D1Q6GTS8 502 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 TRIM67Q6ZTA4 783 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 GALNT4Q8N4A0 578 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 C2CD4AQ8NCU7 369 aaPredicted RBP17.89■□□□□ 0.45
RTN4-204ENST00000357732 PRKD2Q9BZL6 878 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 ULBP1Q9BZM6 244 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 CACNA2D2Q9NY47 1150 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 CEPT1Q9Y6K0 416 aa17.89■□□□□ 0.45
RTN4-204ENST00000357732 SMIM35A0A1B0GVV1 85 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 ARHGEF37A1IGU5 675 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 TRMUO75648 421 aaKnown RBP17.88■□□□□ 0.45
RTN4-204ENST00000357732 STAMBPO95630 424 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 JCHAINP01591 159 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 TPH1P17752 444 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 AKAP5P24588 427 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 ALDH3B2P48448 385 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 CD151P48509 253 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 DGKDQ16760 1214 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 HFE2Q6ZVN8 426 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 ERI1Q8IV48 349 aaKnown RBP17.88■□□□□ 0.45
RTN4-204ENST00000357732 CCNYL1Q8N7R7 359 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 SPPL2BQ8TCT7 592 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 PPP1R14BQ96C90 147 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 NXNL1Q96CM4 212 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 APOL2Q9BQE5 337 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 TRMOQ9BU70 441 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 POMKQ9H5K3 350 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 DDIT4Q9NX09 232 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 OR12D3Q9UGF7 316 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 COL4A4P53420 1690 aaPredicted RBP17.88■□□□□ 0.45
RTN4-204ENST00000357732 STX16-NPEPL1H3BU86 382 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 NRP1O14786 923 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 HSPA8P11142 646 aaKnown RBP17.88■□□□□ 0.45
RTN4-204ENST00000357732 SAT1P21673 171 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 ACADVLP49748 655 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 PDAP1Q13442 181 aaKnown RBP17.88■□□□□ 0.45
RTN4-204ENST00000357732 FAM83EQ2M2I3 478 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 KIAA0930Q6ICG6 404 aaPredicted RBP17.88■□□□□ 0.45
RTN4-204ENST00000357732 PACRGLQ8N7B6 248 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 RNF148Q8N7C7 305 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 ADAM32Q8TC27 787 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 MED10Q9BTT4 135 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 WDCPQ9H6R7 721 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 ANLNQ9NQW6 1124 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 ENTPD7Q9NQZ7 604 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 RSL24D1Q9UHA3 163 aaKnown RBP17.88■□□□□ 0.45
RTN4-204ENST00000357732 PCDHGB4Q9UN71 923 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 MYRFQ9Y2G1 1151 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 TCAF1Q9Y4C2 921 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 PCDHGB5Q9Y5G0 923 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 PCNTO95613 3336 aa17.88■□□□□ 0.45
RTN4-204ENST00000357732 I6L893 689 aaPredicted RBP17.87■□□□□ 0.45
RTN4-204ENST00000357732 PSMD12O00232 456 aaPredicted RBP17.87■□□□□ 0.45
RTN4-204ENST00000357732 MMP3P08254 477 aa17.87■□□□□ 0.45
RTN4-204ENST00000357732 NCAM1P13591 858 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms