RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 MDGA1Q8NFP4 955 aa4.08□□□□□ -1.76
LIG4-201ENST00000356922 ATL2Q8NHH9 583 aa4.08□□□□□ -1.76
LIG4-201ENST00000356922 MRGPRX2Q96LB1 330 aa4.08□□□□□ -1.76
LIG4-201ENST00000356922 MRGPRX1Q96LB2 322 aa4.08□□□□□ -1.76
LIG4-201ENST00000356922 ZNF778Q96MU6 729 aa4.08□□□□□ -1.76
LIG4-201ENST00000356922 HHIPQ96QV1 700 aa4.08□□□□□ -1.76
LIG4-201ENST00000356922 GABRG3Q99928 467 aa4.08□□□□□ -1.76
LIG4-201ENST00000356922 MGME1Q9BQP7 344 aa4.08□□□□□ -1.76
LIG4-201ENST00000356922 CHKBQ9Y259 395 aa4.08□□□□□ -1.76
LIG4-201ENST00000356922 ITM2BQ9Y287 266 aa4.08□□□□□ -1.76
LIG4-201ENST00000356922 C5orf60A6NFR6 353 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 GOLGA8MH3BSY2 632 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 K7ESF4 209 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 PMPCBO75439 489 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 GCATO75600 419 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 TMEM63AO94886 807 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 ATP5BP06576 529 aaKnown RBP4.07□□□□□ -1.76
LIG4-201ENST00000356922 F7P08709 466 aaPredicted RBP4.07□□□□□ -1.76
LIG4-201ENST00000356922 MYBL2P10244 700 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 TPH1P17752 444 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 GABRG2P18507 467 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 NTSR1P30989 418 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 RPL21P46778 160 aaKnown RBP4.07□□□□□ -1.76
LIG4-201ENST00000356922 TAS2R38P59533 333 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 RHOAP61586 193 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 CRADDP78560 199 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 ITKQ08881 620 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 CAMK2GQ13555 558 aaPredicted RBP4.07□□□□□ -1.76
LIG4-201ENST00000356922 PCSK7Q16549 785 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 MSS51Q4VC12 460 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 TMCO4Q5TGY1 634 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 KCTD11Q693B1 232 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 RETSATQ6NUM9 610 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 NCEH1Q6PIU2 408 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 ZNF534Q76KX8 674 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 JAMLQ86YT9 394 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 TMPRSS6Q8IU80 811 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 HOMEZQ8IX15 550 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 OR2AP1Q8NGE2 309 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 PBXIP1Q96AQ6 731 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 ARRDC3Q96B67 414 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 ZBTB9Q96C00 473 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 IMP4Q96G21 291 aaKnown RBP4.07□□□□□ -1.76
LIG4-201ENST00000356922 CCDC114Q96M63 670 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 WDR83Q9BRX9 315 aaKnown RBP4.07□□□□□ -1.76
LIG4-201ENST00000356922 TPSD1Q9BZJ3 242 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 EBF2Q9HAK2 575 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 GLOD4Q9HC38 313 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 PCYOX1Q9UHG3 505 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 HPCAL4Q9UM19 191 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 EML5Q05BV3 1969 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 MID1O15344 667 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 BUD23O43709 281 aaKnown RBP4.07□□□□□ -1.76
LIG4-201ENST00000356922 FZD6O60353 706 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 PIAS1O75925 651 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 KRT14P02533 472 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 UGT2B4P06133 528 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 ALPIP09923 528 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 HOXB2P14652 356 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 MX2P20592 715 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 ECHS1P30084 290 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 RENBPP51606 427 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 DMC1Q14565 340 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 EIF4HQ15056 248 aaKnown RBP4.07□□□□□ -1.76
LIG4-201ENST00000356922 CARD16Q5EG05 197 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 HP1BP3Q5SSJ5 553 aaPredicted RBP4.07□□□□□ -1.76
LIG4-201ENST00000356922 DENND2CQ68D51 928 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 ALG1LQ6GMV1 187 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 ANO7Q6IWH7 933 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 KDELC1Q6UW63 502 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 NUDT18Q6ZVK8 323 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 CPT1BQ92523 772 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 SPATA13Q96N96 652 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 TRIB3Q96RU7 358 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 ZDHHC6Q9H6R6 413 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 PLAC1Q9HBJ0 212 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 RAB6BQ9NRW1 208 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 TMEM51Q9NW97 253 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 GRHL1Q9NZI5 618 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 SNX24Q9Y343 169 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 KCTD3Q9Y597 815 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 GVINP1Q7Z2Y8 2422 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 CCDC78A2IDD5 438 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 BHMG1C9JSJ3 638 aaPredicted RBP4.07□□□□□ -1.76
LIG4-201ENST00000356922 MAN2B1O00754 1011 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 PPP1R12AO14974 1030 aaPredicted RBP4.07□□□□□ -1.76
LIG4-201ENST00000356922 NCAM2O15394 837 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 GPR39O43194 453 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 IL1BP01584 269 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 ATXN1LP0C7T5 689 aaKnown RBP4.07□□□□□ -1.76
LIG4-201ENST00000356922 CTPS1P17812 591 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 AOC1P19801 751 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 CHRNA3P32297 505 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 ACSL1P33121 698 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 ADRA1AP35348 466 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 RPS14P62263 151 aaKnown RBP4.07□□□□□ -1.76
LIG4-201ENST00000356922 DR1Q01658 176 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 NSUN2Q08J23 767 aaKnown RBP eCLIP4.07□□□□□ -1.76
LIG4-201ENST00000356922 GPS1Q13098 491 aa4.07□□□□□ -1.76
LIG4-201ENST00000356922 GALNT3Q14435 633 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms