RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 GALNT18Q6P9A2 607 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 MEIOBQ8N635 442 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 FAM98AQ8NCA5 519 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 FAR1Q8WVX9 515 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 CPSF1Q10570 1443 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 RIPK2O43353 540 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 MBTD1Q05BQ5 628 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 RTL4Q6ZR62 310 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 TXNRD3Q86VQ6 643 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 ITCHQ96J02 903 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 RSL1D1O76021 490 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 RLN1P04808 185 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 IL1R1P14778 569 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 RPS6KA3P51812 740 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 RASAL3Q86YV0 1011 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 PMM1Q92871 262 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 RNF31Q96EP0 1072 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 TRIM2Q9C040 744 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 KCNK1O00180 336 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 AHCYL1O43865 530 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 SNAP47Q5SQN1 464 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 CD101Q93033 1021 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 CST11Q9H112 138 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 H0Y858 1186 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 DNASE1L1P49184 302 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 SMIM5Q71RC9 77 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 NKAPQ8N5F7 415 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 ZNF540Q8NDQ6 660 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 ZNF483Q8TF39 744 aaPredicted RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 ATXN2Q99700 1313 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 MAGEC1O60732 1142 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 SLC26A3P40879 764 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 GIT2Q14161 759 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 RFX4Q33E94 735 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 BROXQ5VW32 411 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 ARHGAP36Q6ZRI8 547 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 USP49Q70CQ1 688 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 TM6SF2Q9BZW4 377 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 PDE4DIPQ5VU43 2346 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 CASKO14936 926 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 TOP3BO95985 862 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 CD86P42081 329 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 PPP2R2BQ00005 443 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 SQLEQ14534 574 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 ZIK1Q3SY52 487 aaPredicted RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 LLGL2Q6P1M3 1020 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 C3orf67Q6ZVT6 689 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 FAM81AQ8TBF8 368 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 LEF1Q9UJU2 399 aaPredicted RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 HOXB8P17481 243 aaPredicted RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 FAAP100Q0VG06 881 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 XKR6Q5GH73 641 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 ATG9AQ7Z3C6 839 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 ATP5C1P36542 298 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 CREMQ03060 361 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 ACAP1Q15027 740 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 MAPKAPK3Q16644 382 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 PSMA8Q8TAA3 256 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 TAS1R2Q8TE23 839 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 HNRNPLLQ8WVV9 542 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 C3orf18Q9UK00 162 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 SAMHD1Q9Y3Z3 626 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 OR7A10O76100 309 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 CCNDBP1O95273 360 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 APOC1P02654 83 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 DBTP11182 482 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 CES1P23141 567 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 C9orf131Q5VYM1 1079 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 PIH1D2Q8WWB5 315 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 ZNF75CPQ92670 426 aaPredicted RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 PLEKHG4BQ96PX9 1271 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 TRIM64A6NGJ6 449 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 ISM1B1AKI9 464 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 MRPS22P82650 360 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 ISLR2Q6UXK2 745 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 SOCS4Q8WXH5 440 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 SNRPB2P08579 225 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 C5orf22Q49AR2 442 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 SCUBE3Q8IX30 993 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 ABRAQ8N0Z2 381 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 OR2L3Q8NG85 312 aa5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 PTCD2Q8WV60 388 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-201ENST00000355086 LCA5LO95447 670 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 ZNF268Q14587 947 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 RGS21Q2M5E4 152 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 ATP6V1C2Q8NEY4 427 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 IL12AP29459 219 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 MANFP55145 182 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 BRD9Q9H8M2 597 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 PTENP60484 403 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 AP5B1Q2VPB7 878 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 FAM91A1Q658Y4 838 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 REPS2Q8NFH8 660 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 PPP3R2Q96LZ3 170 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 XPNPEP3Q9NQH7 507 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 CLEC4AQ9UMR7 237 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 STXBP5Q5T5C0 1151 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 DEF8Q6ZN54 512 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 MARK4Q96L34 752 aa5.82□□□□□ -1.48
SRGAP1-201ENST00000355086 SMCO3A2RU48 225 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms