RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 PCDHB1Q9Y5F3 818 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 RRP8O43159 456 aaKnown RBP17.11■□□□□ 0.33
SMN1-201ENST00000351205 KDELR3O43731 214 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 OPA1O60313 960 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 POP4O95707 220 aaKnown RBP17.11■□□□□ 0.33
SMN1-201ENST00000351205 COPB1P53618 953 aaKnown RBP17.11■□□□□ 0.33
SMN1-201ENST00000351205 SYCP1Q15431 976 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 MYLK3Q32MK0 819 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 LRRC73Q5JTD7 316 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 CDCP2Q5VXM1 449 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 WDR59Q6PJI9 974 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 SLFN11Q7Z7L1 901 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 PHF13Q86YI8 300 aaPredicted RBP17.11■□□□□ 0.33
SMN1-201ENST00000351205 PYROXD2Q8N2H3 581 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 C3orf20Q8ND61 904 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 BAP1Q92560 729 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 FGF11Q92914 225 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 KLHL32Q96NJ5 620 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 SELENOOQ9BVL4 669 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 OSBPL1AQ9BXW6 950 aa17.11■□□□□ 0.33
SMN1-201ENST00000351205 NOL6Q9H6R4 1146 aaKnown RBP17.11■□□□□ 0.33
SMN1-201ENST00000351205 IPO11Q9UI26 975 aaKnown RBP17.11■□□□□ 0.33
SMN1-201ENST00000351205 COL27A1Q8IZC6 1860 aaPredicted RBP17.1■□□□□ 0.33
SMN1-201ENST00000351205 ZSCAN5CA6NGD5 496 aaPredicted RBP17.1■□□□□ 0.33
SMN1-201ENST00000351205 H3BM21 787 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 AREL1O15033 823 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 BUB1O43683 1085 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 TMCC1O94876 653 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 CALB1P05937 261 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 GP1BAP07359 652 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 PFN3P60673 137 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 CLEC17AQ6ZS10 378 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 RBM43Q6ZSC3 357 aaKnown RBP17.1■□□□□ 0.33
SMN1-201ENST00000351205 MON1BQ7L1V2 547 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 ZNF354CQ86Y25 554 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 RTL3Q8N8U3 475 aaKnown RBP17.1■□□□□ 0.33
SMN1-201ENST00000351205 NETO2Q8NC67 525 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 DENND6BQ8NEG7 585 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 NEK11Q8NG66 645 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 ASB12Q8WXK4 309 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 ARHGEF26Q96DR7 871 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 PCMTD1Q96MG8 357 aaPredicted RBP17.1■□□□□ 0.33
SMN1-201ENST00000351205 GDAP1L1Q96MZ0 367 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 USP29Q9HBJ7 922 aa17.1■□□□□ 0.33
SMN1-201ENST00000351205 LRRK1Q38SD2 2015 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 GCN1Q92616 2671 aaKnown RBP17.09■□□□□ 0.33
SMN1-201ENST00000351205 KALRNO60229 2985 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 MGAQ8IWI9 3026 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 TCRBV5S1A1TA0A578 114 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 SIGLEC16A6NMB1 481 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 CCP110O43303 1012 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 AQP9O43315 295 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 JUNDP17535 347 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 EPHB2P29323 1055 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 ACTN2P35609 894 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 DUSP3P51452 185 aaPredicted RBP17.09■□□□□ 0.33
SMN1-201ENST00000351205 EIF2B5Q13144 721 aaKnown RBP17.09■□□□□ 0.33
SMN1-201ENST00000351205 TBC1D25Q3MII6 688 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 EFHC2Q5JST6 749 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 ZCCHC8Q6NZY4 707 aaKnown RBP17.09■□□□□ 0.33
SMN1-201ENST00000351205 DNAJC24Q6P3W2 148 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 SCYL2Q6P3W7 929 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 GDPD4Q6W3E5 623 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 IFI44Q8TCB0 444 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 CENPTQ96BT3 561 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 DEPDC7Q96QD5 511 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 TTYH3Q9C0H2 523 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 KLC2Q9H0B6 622 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 PRORYQ9H606 182 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 SEPT11Q9NVA2 429 aaKnown RBP17.09■□□□□ 0.33
SMN1-201ENST00000351205 LIMA1Q9UHB6 759 aaKnown RBP17.09■□□□□ 0.33
SMN1-201ENST00000351205 RAI2Q9Y5P3 530 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 CSNK1G3Q9Y6M4 447 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 RP1P56715 2156 aa17.09■□□□□ 0.33
SMN1-201ENST00000351205 LGALS16A8MUM7 142 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 CSO75390 466 aaKnown RBP17.08■□□□□ 0.32
SMN1-201ENST00000351205 IGSF6O95976 241 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 ITIH2P19823 946 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 IGFALSP35858 605 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 ZNF143P52747 638 aaPredicted RBP17.08■□□□□ 0.32
SMN1-201ENST00000351205 RPL7AP62424 266 aaKnown RBP17.08■□□□□ 0.32
SMN1-201ENST00000351205 C1QBPQ07021 282 aaKnown RBP17.08■□□□□ 0.32
SMN1-201ENST00000351205 CDKN3Q16667 212 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 DEFB133Q30KQ1 61 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 TTC7BQ86TV6 843 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 VPS36Q86VN1 386 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 RBFAQ8N0V3 343 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 ANKRD20A12PQ8NF67 263 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 MAPK15Q8TD08 544 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 LMX1AQ8TE12 382 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 CASKIN2Q8WXE0 1202 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 HMCESQ96FZ2 354 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 MCEEQ96PE7 176 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 ABCG4Q9H172 646 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 TCEAL2Q9H3H9 227 aaPredicted RBP17.08■□□□□ 0.32
SMN1-201ENST00000351205 EVA1BQ9NVM1 165 aa17.08■□□□□ 0.32
SMN1-201ENST00000351205 EIF4E1BA6NMX2 242 aaKnown RBP17.07■□□□□ 0.32
SMN1-201ENST00000351205 RASA4BC9J798 803 aa17.07■□□□□ 0.32
SMN1-201ENST00000351205 RASA4O43374 803 aa17.07■□□□□ 0.32
SMN1-201ENST00000351205 CREB3O43889 395 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms