RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 BNIP2Q12982 314 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 TXNRD3NBQ6F5E7 133 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 ZNF438Q7Z4V0 828 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 MAPKAPK5Q8IW41 473 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 MCOLN2Q8IZK6 566 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 CANT1Q8WVQ1 401 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 BIRC7Q96CA5 298 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 ASB9Q96DX5 294 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 C17orf62Q9BQA9 187 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 CCSER2Q9H7U1 834 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 JMJD4Q9H9V9 463 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 SPC25Q9HBM1 224 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 TCF7L2Q9NQB0 619 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 CYP26B1Q9NR63 512 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 ACTR3BQ9P1U1 418 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 PCDH10Q9P2E7 1040 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 VPS4AQ9UN37 437 aa10.77□□□□□ -0.69
CAPN3-203ENST00000349748 PDZK1P1A8MUH7 402 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 SERPINE1P05121 402 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 PTGER2P43116 358 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 ADCY7P51828 1080 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 PTPN5P54829 565 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 PCLAFQ15004 111 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 SMAD1Q15797 465 aaKnown RBP10.76□□□□□ -0.69
CAPN3-203ENST00000349748 GEN1Q17RS7 908 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 AGAP6Q5VW22 663 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 PLA2G4FQ68DD2 849 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 EPGNQ6UW88 154 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 CCBE1Q6UXH8 406 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-203ENST00000349748 MYCT1Q8N699 235 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 ANKFN1Q8N957 763 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 MFSD2AQ8NA29 543 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 SH3KBP1Q96B97 665 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 NRBF2Q96F24 287 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 AGAP4Q96P64 663 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 DHX33Q9H6R0 707 aaKnown RBP10.76□□□□□ -0.69
CAPN3-203ENST00000349748 EHMT1Q9H9B1 1298 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 AGPAT3Q9NRZ7 376 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 RAB20Q9NX57 234 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 ZNRF3Q9ULT6 936 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 AURKCQ9UQB9 309 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 PCDHGA10Q9Y5H3 936 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 AREL1O15033 823 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 SHOXO15266 292 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 UGT2B11O75310 529 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 ITGAVP06756 1048 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 RFX1P22670 979 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 GLDCP23378 1020 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 SLC7A1P30825 629 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 NUDT1P36639 197 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 ABCE1P61221 599 aaKnown RBP10.76□□□□□ -0.69
CAPN3-203ENST00000349748 PTP4A2Q12974 167 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 CTF1Q16619 201 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 BRMS1LQ5PSV4 323 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 STYK1Q6J9G0 422 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 DRICH1Q6PGQ1 229 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-203ENST00000349748 PCGF5Q86SE9 256 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 CAMK1DQ8IU85 385 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 OR6Q1Q8NGQ2 317 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 GRPEL2Q8TAA5 225 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 DDX1Q92499 740 aaKnown RBP10.76□□□□□ -0.69
CAPN3-203ENST00000349748 SNAPC3Q92966 411 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 TOE1Q96GM8 510 aaKnown RBP10.76□□□□□ -0.69
CAPN3-203ENST00000349748 ADNPQ9H2P0 1102 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 ADAMTS10Q9H324 1103 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 LRRC40Q9H9A6 602 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 CPSF3Q9UKF6 684 aaKnown RBP10.76□□□□□ -0.69
CAPN3-203ENST00000349748 DRG1Q9Y295 367 aaKnown RBP10.76□□□□□ -0.69
CAPN3-203ENST00000349748 SNED1Q8TER0 1413 aa10.76□□□□□ -0.69
CAPN3-203ENST00000349748 FRMPD2Q68DX3 1309 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-203ENST00000349748 SLC9A3R1O14745 358 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-203ENST00000349748 UPK1BO75841 260 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 NDST3O95803 873 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 GTF2E2P29084 291 aaKnown RBP10.75□□□□□ -0.69
CAPN3-203ENST00000349748 EIF2DP41214 584 aaKnown RBP10.75□□□□□ -0.69
CAPN3-203ENST00000349748 RHAGQ02094 409 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 AOC3Q16853 763 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 CLVS2Q5SYC1 327 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 SHEQ5VZ18 495 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 ADCK1Q86TW2 530 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 CAND1Q86VP6 1230 aaKnown RBP10.75□□□□□ -0.69
CAPN3-203ENST00000349748 TMEM151BQ8IW70 566 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 ZNF444Q8N0Y2 327 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-203ENST00000349748 NLGN2Q8NFZ4 835 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 RP9Q8TA86 221 aaKnown RBP10.75□□□□□ -0.69
CAPN3-203ENST00000349748 MOCS1Q9NZB8 636 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 SEPT10Q9P0V9 454 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 OAZ3Q9UMX2 235 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 RIPK3Q9Y572 518 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 TEX264Q9Y6I9 313 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 MAST2Q6P0Q8 1798 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 M0R3G1 203 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 EI24O14681 340 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 OR7A10O76100 309 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 SNAP29O95721 258 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 RALBP11234 206 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 BMP2P12643 396 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 CBX5P45973 191 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 GABRB2P47870 512 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 BST2Q10589 180 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms