RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 CISD3P0C7P0 127 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 ATXN1LP0C7T5 689 aaKnown RBP11.11□□□□□ -0.63
ECM1-201ENST00000346569 ATXN8OSP0DMR3 200 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 TYRP14679 529 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 FCARP24071 287 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 STX2P32856 288 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 MAGOHP61326 146 aaKnown RBP11.11□□□□□ -0.63
ECM1-201ENST00000346569 CDK18Q07002 472 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 DLX2Q07687 328 aaPredicted RBP11.11□□□□□ -0.63
ECM1-201ENST00000346569 COL19A1Q14993 1142 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 DHCR24Q15392 516 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 SLC1A5Q15758 541 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 KLHL38Q2WGJ6 581 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 SPANXN3Q5MJ09 141 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 ATAT1Q5SQI0 421 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 PKN3Q6P5Z2 889 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 ZNF449Q6P9G9 518 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 TRMT10BQ6PF06 316 aaKnown RBP11.11□□□□□ -0.63
ECM1-201ENST00000346569 LINGO4Q6UY18 593 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 EXOC3L1Q86VI1 746 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.11□□□□□ -0.63
ECM1-201ENST00000346569 ZNF557Q8N988 423 aaPredicted RBP11.11□□□□□ -0.63
ECM1-201ENST00000346569 BPIFB1Q8TDL5 484 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 DCAKDQ8WVC6 231 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 SLC44A1Q8WWI5 657 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 TRIB3Q96RU7 358 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 BBS2Q9BXC9 721 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 CENPHQ9H3R5 247 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 CHRAC1Q9NRG0 131 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 HAUS2Q9NVX0 235 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 CTNNAL1Q9UBT7 734 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 ADAM21Q9UKJ8 722 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 CDH7Q9ULB5 785 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 MTCH2Q9Y6C9 303 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 MYOFQ9NZM1 2061 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 C2orf16Q68DN1 1984 aa11.11□□□□□ -0.63
ECM1-201ENST00000346569 SMIM23A6NLE4 172 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 HEPACAM2A8MVW5 462 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 NEDD8-MDP1E9PL57 170 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 K7ERQ8 282 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 SMAD6O43541 496 aaKnown RBP11.1□□□□□ -0.63
ECM1-201ENST00000346569 RRP9O43818 475 aaKnown RBP11.1□□□□□ -0.63
ECM1-201ENST00000346569 ATP9BO43861 1147 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 PIAS1O75925 651 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 USP1O94782 785 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 POLBP06746 335 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 ADRA1DP25100 572 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 LTBRP36941 435 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 CHRNA4P43681 627 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 CSNK1DP48730 415 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 SCNN1BP51168 640 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 GYS2P54840 703 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 DMC1Q14565 340 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 CRYMQ14894 314 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 EFTUD2Q15029 972 aaKnown RBP eCLIP11.1□□□□□ -0.63
ECM1-201ENST00000346569 PITRM1Q5JRX3 1037 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 RALGPS1Q5JS13 557 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 TANGO2Q6ICL3 276 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 RETSATQ6NUM9 610 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 CASC4Q6P4E1 433 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 NCEH1Q6PIU2 408 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 CES3Q6UWW8 571 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 KDELC2Q7Z4H8 507 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 LRRC6Q86X45 466 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 UNC5BQ8IZJ1 945 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 PTCD2Q8WV60 388 aaKnown RBP11.1□□□□□ -0.63
ECM1-201ENST00000346569 ASIC4Q96FT7 647 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 FEM1CQ96JP0 617 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 MSLNLQ96KJ4 702 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 ZNF778Q96MU6 729 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 RANBP9Q96S59 729 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 PAFAH2Q99487 392 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 FAM83CQ9BQN1 747 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 TTYH1Q9H313 450 aaPredicted RBP11.1□□□□□ -0.63
ECM1-201ENST00000346569 MRM3Q9HC36 420 aaKnown RBP11.1□□□□□ -0.63
ECM1-201ENST00000346569 DUS2Q9NX74 493 aaKnown RBP11.1□□□□□ -0.63
ECM1-201ENST00000346569 PRKAG3Q9UGI9 489 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
ECM1-201ENST00000346569 RPS6KL1Q9Y6S9 549 aa11.1□□□□□ -0.63
ECM1-201ENST00000346569 TMEM265A0A087WTH1 108 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 HOXC11O43248 304 aaPredicted RBP11.09□□□□□ -0.63
ECM1-201ENST00000346569 FAM155BO75949 473 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 CYP17A1P05093 508 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 PABPC1P11940 636 aaKnown RBP11.09□□□□□ -0.63
ECM1-201ENST00000346569 HLA-DPA1P20036 260 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 NMBRP28336 390 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 MSH2P43246 934 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 SERPINH1P50454 418 aaKnown RBP11.09□□□□□ -0.63
ECM1-201ENST00000346569 VASPP50552 380 aaPredicted RBP11.09□□□□□ -0.63
ECM1-201ENST00000346569 ADGRE1Q14246 886 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 PCSK7Q16549 785 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 GAB4Q2WGN9 574 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 FUT11Q495W5 492 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 SIRPB2Q5JXA9 342 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 TMEM215Q68D42 235 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 SRLQ86TD4 932 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 METTL3Q86U44 580 aaKnown RBP11.09□□□□□ -0.63
ECM1-201ENST00000346569 ADIPOR2Q86V24 386 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 SLC26A11Q86WA9 606 aa11.09□□□□□ -0.63
ECM1-201ENST00000346569 MFSD6LQ8IWD5 586 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms