RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 MFSD2AQ8NA29 543 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 OR2I1PQ8NGU4 316 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 FAM174AQ8TBP5 190 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 SETD7Q8WTS6 366 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 RFFLQ8WZ73 363 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 KLHL32Q96NJ5 620 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 ZNF599Q96NL3 588 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 TUBGCP5Q96RT8 1024 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 PACSIN1Q9BY11 444 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 CPEB1Q9BZB8 566 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 KLC2Q9H0B6 622 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 RBSNQ9H1K0 784 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 SEPT3Q9UH03 358 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 SNX11Q9Y5W9 270 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 CHD5Q8TDI0 1954 aa15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 J3KR12 359 aa15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 SLC31A1O15431 190 aa15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 FLRT2O43155 660 aa15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 HNRNPA2B1P22626 353 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 NFKBIAP25963 317 aa15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 SERPINA4P29622 427 aa15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 HSPA9P38646 679 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 NOP2P46087 812 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 ELP6Q0PNE2 266 aa15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 CYTH1Q15438 398 aa15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 PARS2Q7L3T8 475 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 DEFB124Q8NES8 71 aa15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 HCAR2Q8TDS4 363 aa15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 KLHDC7BQ96G42 594 aa15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 ZNF641Q96N77 438 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 C1QTNF7Q9BXJ2 289 aa15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 ATP13A3Q9H7F0 1226 aa15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 PCDHGB2Q9Y5G2 931 aa15.98■□□□□ 0.15
TSPAN4-201ENST00000346501 FRYLO94915 3013 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 TLR4O00206 839 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 ADRB1P08588 477 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 TCF4P15884 667 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 GKP32189 559 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 SLC1A1P43005 524 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 CTSKP43235 329 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 MAGEA1P43355 309 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 CSNK1DP48730 415 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 TAS2R38P59533 333 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 NSUN2Q08J23 767 aaKnown RBP eCLIP15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 LBRQ14739 615 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 AFMIDQ63HM1 303 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 ERAP2Q6P179 960 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 NAXDQ8IW45 347 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 ARHGAP12Q8IWW6 846 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 TC2NQ8N9U0 490 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 CXorf40AQ8TE69 158 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 EXOC2Q96KP1 924 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 ZNF830Q96NB3 372 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 PANX2Q96RD6 677 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 ORAI3Q9BRQ5 295 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 ZNF670Q9BS34 389 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 MAK16Q9BXY0 300 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 SLC17A9Q9BYT1 436 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 PDFQ9HBH1 243 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 DKK3Q9UBP4 350 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 LHX3Q9UBR4 397 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 FADS3Q9Y5Q0 445 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 ADAMTS9Q9P2N4 1935 aa15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 CNOT1A5YKK6 2376 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-201ENST00000346501 MED19A0JLT2 244 aaPredicted RBP15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 GJB3O75712 270 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 CD59P13987 128 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 MX2P20592 715 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 POLR2LP62875 67 aaKnown RBP15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 BCL2L1Q07817 233 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 TXNRD3NBQ6F5E7 133 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 TIGD7Q6NT04 549 aaPredicted RBP15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 BRAT1Q6PJG6 821 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 LAYNQ6UX15 382 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 SRLQ86TD4 932 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 TMTC1Q8IUR5 882 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 NPWQ8N729 165 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 KLK6Q92876 244 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 ELF4Q99607 663 aaPredicted RBP15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 CDC6Q99741 560 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 SUV39H2Q9H5I1 410 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 EBF2Q9HAK2 575 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 FNDC3AQ9Y2H6 1198 aaKnown RBP15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 PCDH15Q96QU1 1955 aa15.96■□□□□ 0.15
TSPAN4-201ENST00000346501 ASCC3Q8N3C0 2202 aaKnown RBP15.95■□□□□ 0.14
TSPAN4-201ENST00000346501 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.95■□□□□ 0.14
TSPAN4-201ENST00000346501 A0A1W2PQ67 120 aa15.95■□□□□ 0.14
TSPAN4-201ENST00000346501 SPOPO43791 374 aa15.95■□□□□ 0.14
TSPAN4-201ENST00000346501 SH3BP5O60239 455 aa15.95■□□□□ 0.14
TSPAN4-201ENST00000346501 MTA2O94776 668 aa15.95■□□□□ 0.14
TSPAN4-201ENST00000346501 PRLRP16471 622 aa15.95■□□□□ 0.14
TSPAN4-201ENST00000346501 GRK6P43250 576 aa15.95■□□□□ 0.14
TSPAN4-201ENST00000346501 SCNN1BP51168 640 aa15.95■□□□□ 0.14
TSPAN4-201ENST00000346501 AP1S1P61966 158 aa15.95■□□□□ 0.14
TSPAN4-201ENST00000346501 SIM1P81133 766 aaPredicted RBP15.95■□□□□ 0.14
TSPAN4-201ENST00000346501 ZNF423Q2M1K9 1284 aa15.95■□□□□ 0.14
TSPAN4-201ENST00000346501 ZNF284Q2VY69 593 aa15.95■□□□□ 0.14
TSPAN4-201ENST00000346501 HS1BP3Q53T59 392 aa15.95■□□□□ 0.14
TSPAN4-201ENST00000346501 N4BP2L1Q5TBK1 243 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms