RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 R3HDM2Q9Y2K5 976 aaKnown RBP14.04□□□□□ -0.16
TPM4-202ENST00000344824 FCF1Q9Y324 198 aaKnown RBP14.04□□□□□ -0.16
TPM4-202ENST00000344824 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
TPM4-202ENST00000344824 DCHS1Q96JQ0 3298 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 GOLGA6L10A0A0M3HER8 536 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 SMAD6O43541 496 aaKnown RBP14.03□□□□□ -0.16
TPM4-202ENST00000344824 GNSP15586 552 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 ERCC2P18074 760 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 ETFBP38117 255 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 METAP1P53582 386 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 IRX4P78413 519 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 SFSWAPQ12872 951 aaKnown RBP14.03□□□□□ -0.16
TPM4-202ENST00000344824 KLF1Q13351 362 aaPredicted RBP14.03□□□□□ -0.16
TPM4-202ENST00000344824 SNX1Q13596 522 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 DPYSQ14117 519 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 POLD3Q15054 466 aaPredicted RBP14.03□□□□□ -0.16
TPM4-202ENST00000344824 DUOXA1Q1HG43 343 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 UAP1L1Q3KQV9 507 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 STPG1Q5TH74 334 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 ZNF783Q6ZMS7 281 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 BBS12Q6ZW61 710 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 NLRP14Q86W24 1093 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 KLHL7Q8IXQ5 586 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 PIP4K2CQ8TBX8 421 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 MAIP1Q8WWC4 291 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 ZNF419Q96HQ0 510 aaPredicted RBP14.03□□□□□ -0.16
TPM4-202ENST00000344824 FAM129BQ96TA1 746 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 CATSPERBQ9H7T0 1116 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 SUSD2Q9UGT4 822 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 EIF2B4Q9UI10 523 aaKnown RBP14.03□□□□□ -0.16
TPM4-202ENST00000344824 HPCAL4Q9UM19 191 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 SCML1Q9UN30 329 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 HS3ST2Q9Y278 367 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 HEY1Q9Y5J3 304 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 ACTL7AQ9Y615 435 aa14.03□□□□□ -0.16
TPM4-202ENST00000344824 DCDC2BA2VCK2 349 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 ZNF487B1APH4 448 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 KPNA3O00505 521 aaPredicted RBP14.02□□□□□ -0.16
TPM4-202ENST00000344824 MFSD11O43934 449 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 SLU7O95391 586 aaKnown RBP14.02□□□□□ -0.16
TPM4-202ENST00000344824 IGLV3-19P01714 112 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 PECAM1P16284 738 aaPredicted RBP14.02□□□□□ -0.16
TPM4-202ENST00000344824 ENGP17813 658 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 SDHBP21912 280 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 SERPINH1P50454 418 aaKnown RBP14.02□□□□□ -0.16
TPM4-202ENST00000344824 ZNF135P52742 658 aaPredicted RBP14.02□□□□□ -0.16
TPM4-202ENST00000344824 ARF5P84085 180 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 OTUD4Q01804 1114 aaKnown RBP14.02□□□□□ -0.16
TPM4-202ENST00000344824 SIX1Q15475 284 aaPredicted RBP14.02□□□□□ -0.16
TPM4-202ENST00000344824 NCBP2-AS2Q69YL0 99 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 TMCO3Q6UWJ1 677 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 USP30Q70CQ3 517 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 RABEPKQ7Z6M1 372 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 VSIG1Q86XK7 387 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 RYBPQ8N488 228 aaPredicted RBP14.02□□□□□ -0.16
TPM4-202ENST00000344824 AADATQ8N5Z0 425 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 PLD5Q8N7P1 536 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 RTL3Q8N8U3 475 aaKnown RBP14.02□□□□□ -0.16
TPM4-202ENST00000344824 SPATA4Q8NEY3 305 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 OR14C36Q8NHC7 312 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 CEP76Q8TAP6 659 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 ARHGEF2Q92974 986 aaKnown RBP14.02□□□□□ -0.16
TPM4-202ENST00000344824 RTKNQ9BST9 563 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 TM6SF2Q9BZW4 377 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 DDX47Q9H0S4 455 aaKnown RBP14.02□□□□□ -0.16
TPM4-202ENST00000344824 NEUROG2Q9H2A3 272 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 SGK2Q9HBY8 427 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 TMEM9BQ9NQ34 198 aa14.02□□□□□ -0.16
TPM4-202ENST00000344824 KNL1Q8NG31 2342 aa14.02□□□□□ -0.17
TPM4-202ENST00000344824 LRRC72A6NJI9 287 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 C4orf47A7E2U8 309 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 SLC30A4O14863 429 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 FGF10O15520 208 aaPredicted RBP14.01□□□□□ -0.17
TPM4-202ENST00000344824 ZFXP17010 805 aaPredicted RBP14.01□□□□□ -0.17
TPM4-202ENST00000344824 C5AR1P21730 350 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 HOXD12P35452 270 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 HCAR3P49019 387 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 GBE1Q04446 702 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 KCTD19Q17RG1 926 aaPredicted RBP14.01□□□□□ -0.17
TPM4-202ENST00000344824 ARTNQ5T4W7 220 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 FAM46CQ5VWP2 391 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 SLC9A4Q6AI14 798 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 NCEH1Q6PIU2 408 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.01□□□□□ -0.17
TPM4-202ENST00000344824 B4GALNT4Q76KP1 1039 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 PRELID2Q8N945 189 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 CHST14Q8NCH0 376 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 CADM4Q8NFZ8 388 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 ACTL9Q8TC94 416 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 LRRN4Q8WUT4 740 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 P3H4Q92791 437 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 MAGOHBQ96A72 148 aaKnown RBP14.01□□□□□ -0.17
TPM4-202ENST00000344824 CELF6Q96J87 481 aaKnown RBP14.01□□□□□ -0.17
TPM4-202ENST00000344824 KRT12Q99456 494 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 MAGEH1Q9H213 219 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 ZDHHC6Q9H6R6 413 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 DYRK4Q9NR20 520 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 DLL3Q9NYJ7 618 aa14.01□□□□□ -0.17
TPM4-202ENST00000344824 EVLQ9UI08 416 aaPredicted RBP14.01□□□□□ -0.17
TPM4-202ENST00000344824 SARDHQ9UL12 918 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms