RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ABCB8Q9NUT2 735 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 FAM47E-STBD1D6RA91 191 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 F8W810 466 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 L1CAMP32004 1257 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 KRT20P35900 424 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 ANO7Q6IWH7 933 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 MON1BQ7L1V2 547 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 EBF3Q9H4W6 596 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 ZNF556Q9HAH1 456 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 ARL15Q9NXU5 204 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 C6orf203Q9P0P8 240 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 TEKT2Q9UIF3 430 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 AIM2O14862 343 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 SLC25A14O95258 325 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 ASPAP45381 313 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 CLCN5P51795 746 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 MED21Q13503 144 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 ANKS1BQ7Z6G8 1248 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 GPSM1Q86YR5 675 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 ECSITQ9BQ95 431 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 GPR62Q9BZJ7 368 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 SHCBP1LQ9BZQ2 653 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 PCYOX1Q9UHG3 505 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 DMGDHQ9UI17 866 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 COQ4Q9Y3A0 265 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 CDK7P50613 346 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 POTEHQ6S545 545 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 CIR1Q86X95 450 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 OR7D4Q8NG98 312 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 LRRN4Q8WUT4 740 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 CCT8L2Q96SF2 557 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 LGMNQ99538 433 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 IL12RB2Q99665 862 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 ZCWPW1Q9H0M4 648 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 CRYL1Q9Y2S2 319 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 STRCP1A6NGW2 1772 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 TRBV23OR9-2A0A075B6M9 112 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 TNNI3P19429 210 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 PDE12Q6L8Q7 609 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 CATSPER1Q8NEC5 780 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 PHPT1Q9NRX4 125 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 NCDNQ9UBB6 729 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 SLX4Q8IY92 1834 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 ZSCAN9O15535 394 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 GUCY1B2O75343 617 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 RFPL2O75678 378 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 ANXA5P08758 320 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 RPL22P35268 128 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 TAS2R40P59535 323 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 DAB2IPQ5VWQ8 1189 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 BEND7Q8N7W2 519 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 CSPG4P5Q96PW8 444 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 TMBIM4Q9HC24 238 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 NINJ2Q9NZG7 142 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 ZFP37Q9Y6Q3 630 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 YJEFN3A6XGL0 299 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 E7ENQ6 273 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 ATG13O75143 517 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 ASLP04424 464 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 SSTR1P30872 391 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 NAA20P61599 178 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 LRRC26Q2I0M4 334 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 IFNEQ86WN2 208 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 SIPA1Q96FS4 1042 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 QRFPRQ96P65 431 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 SEMA4AQ9H3S1 761 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 SFXN1Q9H9B4 322 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 GLOD4Q9HC38 313 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 OPTCQ9UBM4 332 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 TELO2Q9Y4R8 837 aa16.55■□□□□ 0.24
SMARCA4-201ENST00000344626 SKIV2L2P42285 1042 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 ZNF473Q8WTR7 871 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 UNKQ9C0B0 810 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 SMG9Q9H0W8 520 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 MAGEA10P43363 369 aaPredicted RBP16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 DNAJC3Q13217 504 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 SPDYCQ5MJ68 293 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 N4BP2L1Q5TBK1 243 aaPredicted RBP16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 TAC4Q86UU9 113 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 ELAC1Q9H777 363 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 FSCN2O14926 492 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 HPGDP15428 266 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 NDST2P52849 883 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 GNA12Q03113 381 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 MILR1Q7Z6M3 343 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 PIP4K2CQ8TBX8 421 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 KLK6Q92876 244 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 APOBEC3GQ9HC16 384 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 KLHL3Q9UH77 587 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 TEX28O15482 410 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 ATP6V1E1P36543 226 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 WNT3AP56704 352 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 WDR5P61964 334 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 USP4Q13107 963 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 CRTC3Q6UUV7 619 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 STAG3L4Q8TBR4 150 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 GLMNQ92990 594 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 PPP1R10Q96QC0 940 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 CYP2S1Q96SQ9 504 aa16.54■□□□□ 0.24
SMARCA4-201ENST00000344626 LIMD1Q9UGP4 676 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms