RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TBL3Q12788 808 aaKnown RBP15.06■□□□□ 0
VIPAS39-202ENST00000343765 ATAD1Q8NBU5 361 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 STYXQ8WUJ0 223 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 FBXO5Q9UKT4 447 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 SSX2IPQ9Y2D8 614 aa15.06■□□□□ 0
VIPAS39-202ENST00000343765 NYNRINQ9P2P1 1898 aaKnown RBP15.05■□□□□ 0
VIPAS39-202ENST00000343765 MATN2O00339 956 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 HDAC3O15379 428 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 CABYRO75952 493 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 SLC10A3P09131 477 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 PAMP19021 973 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 DNAJB2P25686 324 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 CD151P48509 253 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 MLLT6P55198 1093 aaPredicted RBP15.05■□□□□ 0
VIPAS39-202ENST00000343765 TBX4P57082 545 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 DSC2Q02487 901 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 SLC10A7Q0GE19 358 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 LRRC36Q1X8D7 754 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 LSM12Q3MHD2 195 aaKnown RBP15.05■□□□□ 0
VIPAS39-202ENST00000343765 CLLU1OSQ5K130 101 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 LDB1Q86U70 411 aaPredicted RBP15.05■□□□□ 0
VIPAS39-202ENST00000343765 RTN4RL1Q86UN2 441 aaPredicted RBP15.05■□□□□ 0
VIPAS39-202ENST00000343765 KLHDC8BQ8IXV7 354 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 CATSPER2Q96P56 530 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 CYP4F12Q9HCS2 524 aa15.05■□□□□ 0
VIPAS39-202ENST00000343765 MYLKQ15746 1914 aa15.05■□□□□ -0
VIPAS39-202ENST00000343765 SKIP12755 728 aa15.05■□□□□ -0
VIPAS39-202ENST00000343765 TFEBP19484 476 aa15.05■□□□□ -0
VIPAS39-202ENST00000343765 CSRP3P50461 194 aa15.05■□□□□ -0
VIPAS39-202ENST00000343765 CSHL1Q14406 222 aa15.05■□□□□ -0
VIPAS39-202ENST00000343765 ZRSR2Q15696 482 aaKnown RBP15.05■□□□□ -0
VIPAS39-202ENST00000343765 NEPROQ6NW34 567 aa15.05■□□□□ -0
VIPAS39-202ENST00000343765 RANBP10Q6VN20 620 aa15.05■□□□□ -0
VIPAS39-202ENST00000343765 CNTN4Q8IWV2 1026 aa15.05■□□□□ -0
VIPAS39-202ENST00000343765 NUP93Q8N1F7 819 aa15.05■□□□□ -0
VIPAS39-202ENST00000343765 SPDL1Q96EA4 605 aa15.05■□□□□ -0
VIPAS39-202ENST00000343765 UBE2OQ9C0C9 1292 aaKnown RBP15.05■□□□□ -0
VIPAS39-202ENST00000343765 NLRC5Q86WI3 1866 aa15.05■□□□□ -0
VIPAS39-202ENST00000343765 GJB3O75712 270 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 PSEN1P49768 467 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 NUDT2P50583 147 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 KLC1Q07866 573 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 TSTD2Q5T7W7 516 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 IZUMO2Q6UXV1 221 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 RPS27LQ71UM5 84 aaKnown RBP15.04■□□□□ -0
VIPAS39-202ENST00000343765 SNX32Q86XE0 403 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 RDH11Q8TC12 318 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 ACTRT2Q8TDY3 377 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 HEXDCQ8WVB3 486 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 PSMG2Q969U7 264 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 ZNF184Q99676 751 aaPredicted RBP15.04■□□□□ -0
VIPAS39-202ENST00000343765 SP110Q9HB58 689 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 TREX1Q9NSU2 369 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 ARHGAP26Q9UNA1 814 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 PTPRDP23468 1912 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 ARHGEF37A1IGU5 675 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 GRID2O43424 1007 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 CPB1P15086 417 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 PIK3R1P27986 724 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 MS4A13Q5J8X5 152 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 AFMIDQ63HM1 303 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 RAP1GAP2Q684P5 730 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 PAXIP1Q6ZW49 1069 aaPredicted RBP15.04■□□□□ -0
VIPAS39-202ENST00000343765 PTAR1Q7Z6K3 402 aaPredicted RBP15.04■□□□□ -0
VIPAS39-202ENST00000343765 MON1AQ86VX9 555 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 LSMEM2Q8N112 164 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 TXNDC5Q8NBS9 432 aaKnown RBP15.04■□□□□ -0
VIPAS39-202ENST00000343765 C2CD4AQ8NCU7 369 aaPredicted RBP15.04■□□□□ -0
VIPAS39-202ENST00000343765 GPR78Q96P69 363 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 POMKQ9H5K3 350 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 TBC1D13Q9NVG8 400 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 TLR6Q9Y2C9 796 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 LRCH1Q9Y2L9 728 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 SLC27A5Q9Y2P5 690 aa15.04■□□□□ -0
VIPAS39-202ENST00000343765 MYO16Q9Y6X6 1858 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 HNRNPLP14866 589 aaKnown RBP eCLIP15.03■□□□□ -0
VIPAS39-202ENST00000343765 GLDCP23378 1020 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 PLK1P53350 603 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 CCNIQ14094 377 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 TRIM71Q2Q1W2 868 aaKnown RBP15.03■□□□□ -0
VIPAS39-202ENST00000343765 FAM219BQ5XKK7 198 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 CAPRIN2Q6IMN6 1127 aaKnown RBP15.03■□□□□ -0
VIPAS39-202ENST00000343765 TMEM154Q6P9G4 183 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 KDELC1Q6UW63 502 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 OLFM1Q99784 485 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 ZCWPW1Q9H0M4 648 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 GTSE1Q9NYZ3 720 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 PCDH10Q9P2E7 1040 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 SCML2Q9UQR0 700 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 TARM1B6A8C7 271 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 TADA2AO75478 443 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 PEX11BO96011 259 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 HTR7P34969 479 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 ASPHQ12797 758 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 PRKAA1Q13131 559 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 VARS2Q5ST30 1063 aaKnown RBP15.03■□□□□ -0
VIPAS39-202ENST00000343765 MARC1Q5VT66 337 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 KIAA0930Q6ICG6 404 aaPredicted RBP15.03■□□□□ -0
VIPAS39-202ENST00000343765 ACAD11Q709F0 780 aa15.03■□□□□ -0
VIPAS39-202ENST00000343765 DCP1BQ8IZD4 617 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms