RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PUM1Q14671 1186 aaKnown RBP eCLIP19.45■□□□□ 0.7
SYNE4-202ENST00000340477 PAFAH1B3Q15102 231 aaKnown RBP19.45■□□□□ 0.7
SYNE4-202ENST00000340477 STPG1Q5TH74 334 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 TIGD7Q6NT04 549 aaPredicted RBP19.45■□□□□ 0.7
SYNE4-202ENST00000340477 PARS2Q7L3T8 475 aaKnown RBP19.45■□□□□ 0.7
SYNE4-202ENST00000340477 ZSCAN30Q86W11 494 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 ACRBPQ8NEB7 543 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 CCDC112Q8NEF3 446 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 PCDH19Q8TAB3 1148 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 RAPGEF5Q92565 580 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 FAF2Q96CS3 445 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 KLHL32Q96NJ5 620 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 TUBGCP5Q96RT8 1024 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 RTKNQ9BST9 563 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 CPEB1Q9BZB8 566 aaKnown RBP19.45■□□□□ 0.7
SYNE4-202ENST00000340477 ATP13A3Q9H7F0 1226 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 AASDHPPTQ9NRN7 309 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 HYOU1Q9Y4L1 999 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 ALG6Q9Y672 507 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 PLXNA2O75051 1894 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 ADAMTS9Q9P2N4 1935 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 C16orf96A6NNT2 1141 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 BTNL10A8MVZ5 291 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 ARHGAP33O14559 1287 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 SLC30A4O14863 429 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 RNGTTO60942 597 aaKnown RBP19.44■□□□□ 0.7
SYNE4-202ENST00000340477 SERPINA4P29622 427 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 GKP32189 559 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 C21orf59P57076 290 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 PPP2CBP62714 309 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 RACK1P63244 317 aaKnown RBP19.44■□□□□ 0.7
SYNE4-202ENST00000340477 PPP2CAP67775 309 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 KIF5AQ12840 1032 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 NCBP2-AS2Q69YL0 99 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 IL27RAQ6UWB1 636 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 RNF157Q96PX1 679 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 TM9SF3Q9HD45 589 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 TFR2Q9UP52 801 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 DMTF1Q9Y222 760 aa19.44■□□□□ 0.7
SYNE4-202ENST00000340477 CACNA1EQ15878 2313 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 ANKRD36A6QL64 1941 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 PCDH15Q96QU1 1955 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 APOL1O14791 398 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 CER1O95813 267 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 MAT2AP31153 395 aaKnown RBP19.43■□□□□ 0.7
SYNE4-202ENST00000340477 GRIA4P48058 902 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 CSNK1DP48730 415 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 AP1S1P61966 158 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 NSUN2Q08J23 767 aaKnown RBP eCLIP19.43■□□□□ 0.7
SYNE4-202ENST00000340477 GALNT2Q10471 571 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 MARC1Q5VT66 337 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 KIAA1161Q6NSJ0 714 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 SRLQ86TD4 932 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 RFX6Q8HWS3 928 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 TMEM139Q8IV31 216 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 TP53INP2Q8IXH6 220 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 TSEN2Q8NCE0 465 aaKnown RBP19.43■□□□□ 0.7
SYNE4-202ENST00000340477 TPCN2Q8NHX9 752 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 RMDN1Q96DB5 314 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 SERAC1Q96JX3 654 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 ZNF641Q96N77 438 aaPredicted RBP19.43■□□□□ 0.7
SYNE4-202ENST00000340477 PSKH2Q96QS6 385 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 RXFP3Q9NSD7 469 aa19.43■□□□□ 0.7
SYNE4-202ENST00000340477 SPTBN4Q9H254 2564 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 A0A1W2PQU0 124 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 GOLGA6L3A6NEY3 463 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 C4orf47A7E2U8 309 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 LATO43561 262 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 AP1G1O43747 822 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 MAFKO60675 156 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 OPHN1O60890 802 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 GARSP41250 739 aaKnown RBP19.42■□□□□ 0.7
SYNE4-202ENST00000340477 MMP13P45452 471 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 SUOXP51687 545 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 TAS2R38P59533 333 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 RPS21P63220 83 aaKnown RBP19.42■□□□□ 0.7
SYNE4-202ENST00000340477 BCL2L1Q07817 233 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 GRIK2Q13002 908 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 TFDP2Q14188 446 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 NAPEPLDQ6IQ20 393 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 HORMAD1Q86X24 394 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 CCDC50Q8IVM0 306 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 HCAR2Q8TDS4 363 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 RNF25Q96BH1 459 aaPredicted RBP19.42■□□□□ 0.7
SYNE4-202ENST00000340477 RBM41Q96IZ5 413 aaKnown RBP19.42■□□□□ 0.7
SYNE4-202ENST00000340477 FEM1CQ96JP0 617 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 DKK3Q9UBP4 350 aa19.42■□□□□ 0.7
SYNE4-202ENST00000340477 REXO2Q9Y3B8 237 aaKnown RBP19.42■□□□□ 0.7
SYNE4-202ENST00000340477 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.41■□□□□ 0.7
SYNE4-202ENST00000340477 PJA2O43164 708 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 TSPAN6O43657 245 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 PIGNO95427 931 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 SCNN1BP51168 640 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 SLC10A7Q0GE19 358 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 UAP1L1Q3KQV9 507 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 ERAP2Q6P179 960 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 BRAT1Q6PJG6 821 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 TTC7BQ86TV6 843 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 MINDY1Q8N5J2 469 aa19.41■□□□□ 0.7
SYNE4-202ENST00000340477 PQLC3Q8N755 202 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms