RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 PEAR1Q5VY43 1037 aaPredicted RBP15.45■□□□□ 0.06
UBE3B-201ENST00000340074 KAZNQ674X7 775 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 KIAA0895LQ68EN5 471 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 TBC1D3GQ6DHY5 549 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 TBC1D3CQ6IPX1 549 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 TCEAL6Q6IPX3 200 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 NPNTQ6UXI9 565 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 GDPD4Q6W3E5 623 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 PRR23CQ6ZRP0 262 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 PARS2Q7L3T8 475 aaKnown RBP15.45■□□□□ 0.06
UBE3B-201ENST00000340074 NT5DC3Q86UY8 548 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 CCDC50Q8IVM0 306 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 RCOR2Q8IZ40 523 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 TBC1D3Q8IZP1 549 aaPredicted RBP15.45■□□□□ 0.06
UBE3B-201ENST00000340074 SYCE1Q8N0S2 351 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 GPR161Q8N6U8 529 aaKnown RBP15.45■□□□□ 0.06
UBE3B-201ENST00000340074 EXD1Q8NHP7 514 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 NSMCE1Q8WV22 266 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 TCEAL3Q969E4 200 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 PSKH2Q96QS6 385 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 CPEB1Q9BZB8 566 aaKnown RBP15.45■□□□□ 0.06
UBE3B-201ENST00000340074 MIR1-1HGQ9H1L0 117 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 KDM4CQ9H3R0 1056 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 EIF2B4Q9UI10 523 aaKnown RBP15.45■□□□□ 0.06
UBE3B-201ENST00000340074 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.45■□□□□ 0.06
UBE3B-201ENST00000340074 CAPN6Q9Y6Q1 641 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 PCDH15Q96QU1 1955 aa15.45■□□□□ 0.06
UBE3B-201ENST00000340074 CCDC66A2RUB6 948 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 C16orf96A6NNT2 1141 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 C10orf142B7Z368 130 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 KRT86O43790 486 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 PIGNO95427 931 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 CCDC175P0C221 793 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 ZFXP17010 805 aaPredicted RBP15.44■□□□□ 0.06
UBE3B-201ENST00000340074 MX2P20592 715 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 CCNCP24863 283 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 DPP6P42658 865 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 CSNK1DP48730 415 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 RENBPP51606 427 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 NEK3P51956 506 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 PPP2CBP62714 309 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 PPP2CAP67775 309 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 NSUN2Q08J23 767 aaKnown RBP eCLIP15.44■□□□□ 0.06
UBE3B-201ENST00000340074 CCDC15Q0P6D6 951 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 ZNF235Q14590 738 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 MARC1Q5VT66 337 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 TIGD7Q6NT04 549 aaPredicted RBP15.44■□□□□ 0.06
UBE3B-201ENST00000340074 FBXL19Q6PCT2 694 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 PEX26Q7Z412 305 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 SRLQ86TD4 932 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 PGBD5Q8N414 524 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 RNF10Q8N5U6 811 aaKnown RBP15.44■□□□□ 0.06
UBE3B-201ENST00000340074 ANP32BQ92688 251 aaKnown RBP15.44■□□□□ 0.06
UBE3B-201ENST00000340074 HDAC11Q96DB2 347 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 RBM41Q96IZ5 413 aaKnown RBP15.44■□□□□ 0.06
UBE3B-201ENST00000340074 TSGA13Q96PP4 275 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 AMFRQ9UKV5 643 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 GUCA1BQ9UMX6 200 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 SLCO1B1Q9Y6L6 691 aa15.44■□□□□ 0.06
UBE3B-201ENST00000340074 DCHS1Q96JQ0 3298 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 hCG_1818297A0A087WSY0 165 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 TTC24A2A3L6 582 aaPredicted RBP15.43■□□□□ 0.06
UBE3B-201ENST00000340074 CST8O60676 142 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 FTCDO95954 541 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 ADRB3P13945 408 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 HOXD12P35452 270 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 MMP13P45452 471 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 PEX5P50542 639 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 SCNN1BP51168 640 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 MAXP61244 160 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 ADCY2Q08462 1091 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 TFDP2Q14188 446 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 GRM3Q14832 879 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 DUOXA1Q1HG43 343 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 TRIM61Q5EBN2 209 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 ZCCHC9Q8N567 271 aaKnown RBP15.43■□□□□ 0.06
UBE3B-201ENST00000340074 TEX26Q8N6G2 289 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 C12orf50Q8NA57 414 aaPredicted RBP15.43■□□□□ 0.06
UBE3B-201ENST00000340074 CCNYQ8ND76 341 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 MAML1Q92585 1016 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 ZNF830Q96NB3 372 aaPredicted RBP15.43■□□□□ 0.06
UBE3B-201ENST00000340074 LGMNQ99538 433 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 PACSIN2Q9UNF0 486 aaPredicted RBP15.43■□□□□ 0.06
UBE3B-201ENST00000340074 KHNYNO15037 678 aaKnown RBP15.43■□□□□ 0.06
UBE3B-201ENST00000340074 MATN3O15232 486 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 CFIP05156 583 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 GNSP15586 552 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 HSPA9P38646 679 aaKnown RBP15.43■□□□□ 0.06
UBE3B-201ENST00000340074 CCR5P51681 352 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 RWDD2BP57060 319 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 IRX4P78413 519 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 PPIDQ08752 370 aaKnown RBP15.43■□□□□ 0.06
UBE3B-201ENST00000340074 HNRNPDQ14103 355 aaKnown RBP15.43■□□□□ 0.06
UBE3B-201ENST00000340074 SLC23A3Q6PIS1 610 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 CAMK1DQ8IU85 385 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 CCDC13Q8IYE1 715 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 BBS5Q8N3I7 341 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 C1orf216Q8TAB5 229 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 CEP76Q8TAP6 659 aa15.43■□□□□ 0.06
UBE3B-201ENST00000340074 ALG3Q92685 438 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms