RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 PIGZQ86VD9 579 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 CMTR2Q8IYT2 770 aaKnown RBP9.5□□□□□ -0.89
NECAP1-201ENST00000339754 DHRSXQ8N5I4 330 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 ATP6V0D2Q8N8Y2 350 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 ZC3H15Q8WU90 426 aaKnown RBP9.5□□□□□ -0.89
NECAP1-201ENST00000339754 FKBP10Q96AY3 582 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 SOX17Q9H6I2 414 aaPredicted RBP9.5□□□□□ -0.89
NECAP1-201ENST00000339754 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.5□□□□□ -0.89
NECAP1-201ENST00000339754 OAZ3Q9UMX2 235 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 PCDHA10Q9Y5I2 948 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.5□□□□□ -0.89
NECAP1-201ENST00000339754 B4GAT1O43505 415 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 CABYRO75952 493 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 ARCN1P48444 511 aaKnown RBP9.5□□□□□ -0.89
NECAP1-201ENST00000339754 CSRP3P50461 194 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 RAD23AP54725 363 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 TPTEP56180 551 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 ATP6V0D1P61421 351 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 ORC1Q13415 861 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 CCDC14Q49A88 953 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 PITRM1Q5JRX3 1037 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 SCYL2Q6P3W7 929 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 WDR49Q8IV35 697 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 MMAAQ8IVH4 418 aaKnown RBP9.5□□□□□ -0.89
NECAP1-201ENST00000339754 HACE1Q8IYU2 909 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 ANKRD52Q8NB46 1076 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 PIWIL1Q96J94 861 aaKnown RBP9.5□□□□□ -0.89
NECAP1-201ENST00000339754 SLC45A3Q96JT2 553 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 AGAP2Q99490 1192 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 NAT9Q9BTE0 207 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 C1QTNF1Q9BXJ1 281 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 DNAI2Q9GZS0 605 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 XYLT2Q9H1B5 865 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 UPF3AQ9H1J1 476 aaKnown RBP9.5□□□□□ -0.89
NECAP1-201ENST00000339754 PARVBQ9HBI1 364 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 PKD2L2Q9NZM6 624 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 HACD3Q9P035 362 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 SCN9AQ15858 1988 aa9.5□□□□□ -0.89
NECAP1-201ENST00000339754 MYO18AQ92614 2054 aaKnown RBP9.5□□□□□ -0.89
NECAP1-201ENST00000339754 YDJCA8MPS7 323 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 TARM1B6A8C7 271 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 K7ERI5 159 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 PHGDHO43175 533 aaKnown RBP9.49□□□□□ -0.89
NECAP1-201ENST00000339754 SYNCRIPO60506 623 aaKnown RBP9.49□□□□□ -0.89
NECAP1-201ENST00000339754 BCAS1O75363 584 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-201ENST00000339754 POLBP06746 335 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 HSPA8P11142 646 aaKnown RBP9.49□□□□□ -0.89
NECAP1-201ENST00000339754 ARSAP15289 507 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 GPD2P43304 727 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 RAP1GAPP47736 663 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 GTF2A2P52657 109 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 AP3M2P53677 418 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 PRKAA2P54646 552 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 ADARB1P78563 741 aaKnown RBP9.49□□□□□ -0.89
NECAP1-201ENST00000339754 CBX2Q14781 532 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-201ENST00000339754 AGKQ53H12 422 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 FAM45BPQ6NSW5 357 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 LAYNQ6UX15 382 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 RDH11Q8TC12 318 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 FAM45AQ8TCE6 357 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 SPPL2BQ8TCT7 592 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 CENPNQ96H22 339 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-201ENST00000339754 QKIQ96PU8 341 aaKnown RBP eCLIP9.49□□□□□ -0.89
NECAP1-201ENST00000339754 TAAR1Q96RJ0 339 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 SNRNP25Q9BV90 132 aaKnown RBP9.49□□□□□ -0.89
NECAP1-201ENST00000339754 HOXD1Q9GZZ0 328 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 ATP13A3Q9H7F0 1226 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 HMG20AQ9NP66 347 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 TCEAL9Q9UHQ7 104 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 FZD1Q9UP38 647 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 AURKCQ9UQB9 309 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 DHRS12A0PJE2 317 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 H0Y858 1186 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 EI24O14681 340 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 PLA2G6O60733 806 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 GMNNO75496 209 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 GRAP2O75791 330 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 MICAL2O94851 1124 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 CYP2F1P24903 491 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 FASP25445 335 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 SLC7A2P52569 658 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 PLA2G16P53816 162 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 CDH8P55286 799 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 FASTKQ14296 549 aaKnown RBP9.49□□□□□ -0.89
NECAP1-201ENST00000339754 HSDL1Q3SXM5 330 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 SPANXN3Q5MJ09 141 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 BSPRYQ5W0U4 402 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 IQSEC1Q6DN90 963 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 SPPL2CQ8IUH8 684 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 BRSK2Q8IWQ3 736 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 RAVER1Q8IY67 606 aaKnown RBP9.49□□□□□ -0.89
NECAP1-201ENST00000339754 PARP8Q8N3A8 854 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 TTC30BQ8N4P2 665 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 Q8N9G6 341 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-201ENST00000339754 COLGALT1Q8NBJ5 622 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 SYTL5Q8TDW5 730 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-201ENST00000339754 CLIP3Q96DZ5 547 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 ARPC5LQ9BPX5 153 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 SLC39A3Q9BRY0 314 aa9.49□□□□□ -0.89
NECAP1-201ENST00000339754 ZNF670Q9BS34 389 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms