RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ISG20Q96AZ6 181 aaKnown RBP15.89■□□□□ 0.13
LINC01116-202ENST00000339037 GRAMD1AQ96CP6 724 aa15.89■□□□□ 0.13
LINC01116-202ENST00000339037 KLF6Q99612 283 aaPredicted RBP15.89■□□□□ 0.13
LINC01116-202ENST00000339037 IL12RB2Q99665 862 aa15.89■□□□□ 0.13
LINC01116-202ENST00000339037 DPH1Q9BZG8 443 aa15.89■□□□□ 0.13
LINC01116-202ENST00000339037 NDST4Q9H3R1 872 aa15.89■□□□□ 0.13
LINC01116-202ENST00000339037 PPARGC1AQ9UBK2 798 aaKnown RBP15.89■□□□□ 0.13
LINC01116-202ENST00000339037 KLF15Q9UIH9 416 aa15.89■□□□□ 0.13
LINC01116-202ENST00000339037 SATB2Q9UPW6 733 aa15.89■□□□□ 0.13
LINC01116-202ENST00000339037 ACTL7AQ9Y615 435 aa15.89■□□□□ 0.13
LINC01116-202ENST00000339037 CXorf51AA0A1B0GTR3 108 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 C16orf96A6NNT2 1141 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 TPP1O14773 563 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 SNPHO15079 494 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 SPINT1O43278 529 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 RBMS1P29558 406 aaKnown RBP15.88■□□□□ 0.13
LINC01116-202ENST00000339037 ACVRL1P37023 503 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 ABL2P42684 1182 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 GEMIN4P57678 1058 aaKnown RBP15.88■□□□□ 0.13
LINC01116-202ENST00000339037 POLD3Q15054 466 aaPredicted RBP15.88■□□□□ 0.13
LINC01116-202ENST00000339037 ZNF805Q5CZA5 627 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 MIIPQ5JXC2 388 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 TPRG1LQ5T0D9 272 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 IGF2-ASQ6U949 168 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 FAM114A1Q8IWE2 563 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 DENND6BQ8NEG7 585 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 TPCN2Q8NHX9 752 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 BTN2A2Q8WVV5 523 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 ARHGEF26Q96DR7 871 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 ATXN7L3BQ96GX2 97 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 VCPIP1Q96JH7 1222 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 SALL4Q9UJQ4 1053 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 TMEM59LQ9UK28 342 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 ITM2BQ9Y287 266 aa15.88■□□□□ 0.13
LINC01116-202ENST00000339037 EME2A4GXA9 379 aaPredicted RBP15.87■□□□□ 0.13
LINC01116-202ENST00000339037 KRIT1O00522 736 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 CD160O95971 181 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 GKP32189 559 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 RPIAP49247 311 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 THOP1P52888 689 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 PFN3P60673 137 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 ATP11AP98196 1134 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 NR0B2Q15466 257 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 VWA3BQ502W6 1294 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 RWDD4Q6NW29 188 aaKnown RBP15.87■□□□□ 0.13
LINC01116-202ENST00000339037 DPY19L2P1Q6NXN4 242 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 RBM44Q6ZP01 1051 aaKnown RBP15.87■□□□□ 0.13
LINC01116-202ENST00000339037 ARCQ7LC44 396 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 ASB12Q8WXK4 309 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 WBP1Q96G27 269 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 OSBPL1AQ9BXW6 950 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 NUP62CLQ9H1M0 184 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 SPASTQ9UBP0 616 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 OR12D3Q9UGF7 316 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 APOBEC3BQ9UH17 382 aaKnown RBP15.87■□□□□ 0.13
LINC01116-202ENST00000339037 GGT7Q9UJ14 662 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 FHOD1Q9Y613 1164 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 SPTA1P02549 2419 aa15.87■□□□□ 0.13
LINC01116-202ENST00000339037 MYO18BQ8IUG5 2567 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 A0A1W2PNU3 283 aaPredicted RBP15.86■□□□□ 0.13
LINC01116-202ENST00000339037 MUSKO15146 869 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 TCEA3O75764 348 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 GSRP00390 522 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 UGT2B4P06133 528 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 HOXB1P14653 301 aaPredicted RBP15.86■□□□□ 0.13
LINC01116-202ENST00000339037 MAPKAPK2P49137 400 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 SNRPD1P62314 119 aaKnown RBP15.86■□□□□ 0.13
LINC01116-202ENST00000339037 EIF2B5Q13144 721 aaKnown RBP15.86■□□□□ 0.13
LINC01116-202ENST00000339037 PTK2BQ14289 1009 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 ARL13BQ3SXY8 428 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 PRRT3Q5FWE3 981 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 KLHDC7AQ5VTJ3 777 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 NAA35Q5VZE5 725 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 CRTC1Q6UUV9 634 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 NOP9Q86U38 636 aaKnown RBP15.86■□□□□ 0.13
LINC01116-202ENST00000339037 RBFAQ8N0V3 343 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 EMC1Q8N766 993 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 OR2AP1Q8NGE2 309 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 CPA5Q8WXQ8 436 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 ARHGEF2Q92974 986 aaKnown RBP15.86■□□□□ 0.13
LINC01116-202ENST00000339037 GLMNQ92990 594 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 NAT6Q93015 286 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 SLC46A1Q96NT5 459 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 TUBGCP2Q9BSJ2 902 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 BOCQ9BWV1 1114 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 METTL5Q9NRN9 209 aaKnown RBP15.86■□□□□ 0.13
LINC01116-202ENST00000339037 NDFIP2Q9NV92 336 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 DNAI1Q9UI46 699 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 HPCAL4Q9UM19 191 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 PCDHGA8Q9Y5G5 932 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 ENTPD2Q9Y5L3 495 aa15.86■□□□□ 0.13
LINC01116-202ENST00000339037 LMO7DNF2Z398 122 aa15.85■□□□□ 0.13
LINC01116-202ENST00000339037 PES1O00541 588 aaKnown RBP15.85■□□□□ 0.13
LINC01116-202ENST00000339037 AREL1O15033 823 aa15.85■□□□□ 0.13
LINC01116-202ENST00000339037 GCATO75600 419 aa15.85■□□□□ 0.13
LINC01116-202ENST00000339037 POP4O95707 220 aaKnown RBP15.85■□□□□ 0.13
LINC01116-202ENST00000339037 RHOQP17081 205 aa15.85■□□□□ 0.13
LINC01116-202ENST00000339037 ERCC5P28715 1186 aaPredicted RBP15.85■□□□□ 0.13
LINC01116-202ENST00000339037 NOMO3P69849 1222 aa15.85■□□□□ 0.13
LINC01116-202ENST00000339037 NRG1Q02297 640 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms