RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 RHOBTB2Q9BYZ6 727 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 PNPOQ9NVS9 261 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 NYAP2Q9P242 653 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 GSAPA4D1B5 854 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 GPR1P46091 355 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 DEFA5Q01523 94 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 PTPN11Q06124 597 aaPredicted RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 SUZ12Q15022 739 aaKnown RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 MAPKAPK3Q16644 382 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 CBWD6Q4V339 395 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 MARC1Q5VT66 337 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 KAT5Q92993 513 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 FBXO32Q969P5 355 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 C11orf24Q96F05 449 aaPredicted RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 GPATCH1Q9BRR8 931 aaKnown RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 CDH19Q9H159 772 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 UCKL1Q9NWZ5 548 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 VPS28Q9UK41 221 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 C2orf71A6NGG8 1288 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 CYB561D2O14569 222 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 CHADO15335 359 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 OR10H3O60404 316 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 FBXO21O94952 628 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 TUFMP49411 452 aaKnown RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 OCLNQ16625 522 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 NPNTQ6UXI9 565 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 TRMT11Q7Z4G4 463 aaKnown RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 GLT6D1Q7Z4J2 308 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 UBE2J2Q8N2K1 259 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 PTGR2Q8N8N7 351 aaPredicted RBP9.89□□□□□ -0.83
COL4A6-201ENST00000334504 C1GALT1C1Q96EU7 318 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 KCNS3Q9BQ31 491 aa9.89□□□□□ -0.83
COL4A6-201ENST00000334504 CCDC189A1A4V9 331 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 DYNC1LI2O43237 492 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 ABHD2P08910 425 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 FGFR1P11362 822 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 AZGP1P25311 298 aaKnown RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 MEA1Q16626 185 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 SMU1Q2TAY7 513 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 STRIP1Q5VSL9 837 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 MPZL3Q6UWV2 235 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 C10orf107Q8IVU9 208 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 PWWP2AQ96N64 755 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 RSPH9Q9H1X1 276 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 OSGEPL1Q9H4B0 414 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 CCSER2Q9H7U1 834 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 TRHDEQ9UKU6 1024 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 ANGPT4Q9Y264 503 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 HACD1B0YJ81 288 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 H3BNX3 289 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 SMIM22K7EJ46 135 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 CHP2O43745 196 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 EDF1O60869 148 aaKnown RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 MICAL2O94851 1124 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 LRIG2O94898 1065 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 MYL4P12829 197 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 ZNF7P17097 686 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 ECT2LQ008S8 904 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 ACSM2AQ08AH3 577 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 PIK3R6Q5UE93 754 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 ACSM2BQ68CK6 577 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 PACS1Q6VY07 963 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 ZNF720Q7Z2F6 126 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 WDR49Q8IV35 697 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 ZBTB8BQ8NAP8 495 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 CERKQ8TCT0 537 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 CPB2Q96IY4 423 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 DNAJC1Q96KC8 554 aaKnown RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 OMDQ99983 421 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 PTTG2Q9NZH5 202 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 AKAP7Q9P0M2 348 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 RAP2CQ9Y3L5 183 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 SQORQ9Y6N5 450 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 SHROOM2Q13796 1616 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 KDM4BO94953 1096 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 NUDT17P0C025 328 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 ZNF24P17028 368 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 CCR4P51679 360 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 TKTL1P51854 596 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 PPP2R2BQ00005 443 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 MYBPC1Q00872 1141 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 GNA13Q14344 377 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 KCNT2Q6UVM3 1135 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 SCIMPQ6UWF3 145 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 KATNAL2Q8IYT4 538 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 TOP1MTQ969P6 601 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 TAAR1Q96RJ0 339 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 TNKS2Q9H2K2 1166 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 TRIT1Q9H3H1 467 aaKnown RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 ELL3Q9HB65 397 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 SAE1Q9UBE0 346 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 PCDHB7Q9Y5E2 793 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 SLC12A8A0AV02 714 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 RGS10O43665 173 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 HBP1O60381 514 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 MBL2P11226 248 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-201ENST00000334504 EPORP19235 508 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 ACADLP28330 430 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 MAPK9P45984 424 aa9.88□□□□□ -0.83
COL4A6-201ENST00000334504 SLC7A2P52569 658 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms