RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PIGNO95427 931 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 ABCB1P08183 1280 aaPredicted RBP15.15■□□□□ 0.02
C9orf47-201ENST00000334490 KCNA3P22001 575 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 L1CAMP32004 1257 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 MAP3K10Q02779 954 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 GNA12Q03113 381 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 AUHQ13825 339 aaKnown RBP15.15■□□□□ 0.02
C9orf47-201ENST00000334490 DUPD1Q68J44 220 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 CCDC185Q8N715 623 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 OR4L1Q8NH43 312 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 ZNF516Q92618 1163 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 VPS50Q96JG6 964 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 COG5Q9UP83 839 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 ANKDD1BA6NHY2 528 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 FTH1P02794 183 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 TFEBP19484 476 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 PSMA4P25789 261 aaKnown RBP15.15■□□□□ 0.02
C9orf47-201ENST00000334490 CHRNB3Q05901 458 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 FAM187BQ17R55 369 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 PAGE2BQ5JRK9 111 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 SCHIP1Q9P0W5 487 aaPredicted RBP15.15■□□□□ 0.02
C9orf47-201ENST00000334490 MC4RP32245 332 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 GRM3Q14832 879 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 IL27RAQ6UWB1 636 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 OTOP3Q7RTS5 596 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 PYROXD2Q8N2H3 581 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 TEX9Q8N6V9 391 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 KCND1Q9NSA2 647 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 KLQ9UEF7 1012 aa15.15■□□□□ 0.02
C9orf47-201ENST00000334490 NOCTQ9UK39 431 aaKnown RBP15.15■□□□□ 0.02
C9orf47-201ENST00000334490 R3HDM2Q9Y2K5 976 aaKnown RBP15.15■□□□□ 0.02
C9orf47-201ENST00000334490 MSLNQ13421 630 aaPredicted RBP15.14■□□□□ 0.01
C9orf47-201ENST00000334490 TRIP4Q15650 581 aaPredicted RBP15.14■□□□□ 0.01
C9orf47-201ENST00000334490 TPGS2Q68CL5 300 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 CNSTQ6PJW8 725 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 BBS7Q8IWZ6 715 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 PTGR2Q8N8N7 351 aaPredicted RBP15.14■□□□□ 0.01
C9orf47-201ENST00000334490 C12orf50Q8NA57 414 aaPredicted RBP15.14■□□□□ 0.01
C9orf47-201ENST00000334490 CEP70Q8NHQ1 597 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 WDR48Q8TAF3 677 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 ATL1Q8WXF7 558 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 OSBPL1AQ9BXW6 950 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 ZFP37Q9Y6Q3 630 aaPredicted RBP15.14■□□□□ 0.01
C9orf47-201ENST00000334490 C2CD4BA6NLJ0 364 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 CACNB4O00305 520 aaPredicted RBP15.14■□□□□ 0.01
C9orf47-201ENST00000334490 CYP4F8P98187 520 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 ITIH4Q14624 930 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 KCTD19Q17RG1 926 aaPredicted RBP15.14■□□□□ 0.01
C9orf47-201ENST00000334490 CERCAMQ5T4B2 595 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 CENPLQ8N0S6 344 aaPredicted RBP15.14■□□□□ 0.01
C9orf47-201ENST00000334490 ART4Q93070 314 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 ASB2Q96Q27 587 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 ARHGEF4Q9NR80 690 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 DUOX1Q9NRD9 1551 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 GPR15P49685 360 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 SKP1P63208 163 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 ARHGAP39Q9C0H5 1083 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 PIF1Q9H611 641 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 CCDC134Q9H6E4 229 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 ZFYVE1Q9HBF4 777 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 ZFP14Q9HCL3 533 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 CDV3Q9UKY7 258 aaKnown RBP15.14■□□□□ 0.01
C9orf47-201ENST00000334490 SPEF2Q9C093 1822 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 KRT20P35900 424 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 CDH4P55283 916 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 CIR1Q86X95 450 aaPredicted RBP15.14■□□□□ 0.01
C9orf47-201ENST00000334490 SELENOMQ8WWX9 145 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 ZNF75CPQ92670 426 aaPredicted RBP15.14■□□□□ 0.01
C9orf47-201ENST00000334490 SUSD3Q96L08 255 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 TAGLN3Q9UI15 199 aa15.14■□□□□ 0.01
C9orf47-201ENST00000334490 CD3EAPO15446 510 aaKnown RBP15.13■□□□□ 0.01
C9orf47-201ENST00000334490 ABRQ12979 859 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 LYPLAL1Q5VWZ2 237 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 DNAJB7Q7Z6W7 309 aaPredicted RBP15.13■□□□□ 0.01
C9orf47-201ENST00000334490 HMGXB4Q9UGU5 601 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 RAI2Q9Y5P3 530 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 MEI4A8MW99 385 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 CYP7B1O75881 506 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 ZNF682O95780 498 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 SLC35G4P0C7Q5 338 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 CDKN2BP42772 138 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 SPDYCQ5MJ68 293 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 DNAJC14Q6Y2X3 702 aaPredicted RBP15.13■□□□□ 0.01
C9orf47-201ENST00000334490 CEP68Q76N32 757 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 FAM126BQ8IXS8 530 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 BBS4Q96RK4 519 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 SOHLH2Q9NX45 425 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 SNX10Q9Y5X0 201 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 A0A1W2PRU2 124 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 PPEF2O14830 753 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 RNASEH2AO75792 299 aaKnown RBP15.13■□□□□ 0.01
C9orf47-201ENST00000334490 PPP2R1BP30154 601 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 HTR7P34969 479 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 CRTC3Q6UUV7 619 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 SRLQ86TD4 932 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 P3H2Q8IVL5 708 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 RBFAQ8N0V3 343 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 MTFMTQ96DP5 389 aaKnown RBP15.13■□□□□ 0.01
C9orf47-201ENST00000334490 STARD13Q9Y3M8 1113 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 HNRNPRO43390 633 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms