RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 ITGB7P26010 798 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 CSNK1DP48730 415 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 SLC10A7Q0GE19 358 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 AP1B1Q10567 949 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 POM121L1PQ3SYA9 428 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 SYCP2LQ5T4T6 812 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 PAPD7Q5XG87 772 aaKnown RBP20.78■□□□□ 0.92
MRPL40-201ENST00000333130 AADATQ8N5Z0 425 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 FRMD1Q8N878 549 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 SUMF1Q8NBK3 374 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 TSEN2Q8NCE0 465 aaKnown RBP20.78■□□□□ 0.92
MRPL40-201ENST00000333130 CADM4Q8NFZ8 388 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 MAML1Q92585 1016 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 PBKQ96KB5 322 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 TUBGCP5Q96RT8 1024 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 OSBPL9Q96SU4 736 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 NAPGQ99747 312 aaPredicted RBP20.78■□□□□ 0.92
MRPL40-201ENST00000333130 GPR174Q9BXC1 333 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 CPEB1Q9BZB8 566 aaKnown RBP20.78■□□□□ 0.92
MRPL40-201ENST00000333130 ATP13A3Q9H7F0 1226 aa20.78■□□□□ 0.92
MRPL40-201ENST00000333130 EVLQ9UI08 416 aaPredicted RBP20.78■□□□□ 0.92
MRPL40-201ENST00000333130 TTC7AQ9ULT0 858 aaPredicted RBP20.78■□□□□ 0.92
MRPL40-201ENST00000333130 TPX2Q9ULW0 747 aaKnown RBP20.78■□□□□ 0.92
MRPL40-201ENST00000333130 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 MEI4A8MW99 385 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 UGT2B4P06133 528 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 PRLRP16471 622 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 SERPINA4P29622 427 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 NEK3P51956 506 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 AP1S1P61966 158 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 OTUD4Q01804 1114 aaKnown RBP20.77■□□□□ 0.92
MRPL40-201ENST00000333130 XRCC4Q13426 336 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 PRKD1Q15139 912 aaPredicted RBP20.77■□□□□ 0.92
MRPL40-201ENST00000333130 ZNF805Q5CZA5 627 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 RALGPS1Q5JS13 557 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 LYSMD4Q5XG99 296 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 FBXL19Q6PCT2 694 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 GDPD4Q6W3E5 623 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.77■□□□□ 0.92
MRPL40-201ENST00000333130 CYP2U1Q7Z449 544 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 SRLQ86TD4 932 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 TMEFF1Q8IYR6 380 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 RASGEF1CQ8N431 466 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 TTC13Q8NBP0 860 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 OR14C36Q8NHC7 312 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 ACTL9Q8TC94 416 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 HAUS1Q96CS2 278 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 LGMNQ99538 433 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 HDAC8Q9BY41 377 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 POLR1EQ9GZS1 481 aaKnown RBP20.77■□□□□ 0.92
MRPL40-201ENST00000333130 NEUROG2Q9H2A3 272 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 KDM4CQ9H3R0 1056 aa20.77■□□□□ 0.92
MRPL40-201ENST00000333130 GON4LQ3T8J9 2241 aa20.77■□□□□ 0.91
MRPL40-201ENST00000333130 TNRC6BQ9UPQ9 1833 aaKnown RBP20.76■□□□□ 0.91
MRPL40-201ENST00000333130 CTAGE9A4FU28 777 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 PRR23AA6NEV1 266 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 MTSS1O43312 755 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 ZNF189O75820 626 aaPredicted RBP20.76■□□□□ 0.91
MRPL40-201ENST00000333130 RETP07949 1114 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 CCNB1P14635 433 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 TCP1P17987 556 aaKnown RBP20.76■□□□□ 0.91
MRPL40-201ENST00000333130 DRD3P35462 400 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 SCNN1BP51168 640 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 CNTN1Q12860 1018 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 WDR45BQ5MNZ6 344 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 ERN2Q76MJ5 926 aaKnown RBP20.76■□□□□ 0.91
MRPL40-201ENST00000333130 TEX26Q8N6G2 289 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 OR2T34Q8NGX1 318 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 COG1Q8WTW3 980 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 TFB1MQ8WVM0 346 aaKnown RBP20.76■□□□□ 0.91
MRPL40-201ENST00000333130 ZNF419Q96HQ0 510 aaPredicted RBP20.76■□□□□ 0.91
MRPL40-201ENST00000333130 MGME1Q9BQP7 344 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 NT5MQ9NPB1 228 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 SCUBE2Q9NQ36 999 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 TTLL3Q9Y4R7 772 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 PCDHGA5Q9Y5G8 931 aa20.76■□□□□ 0.91
MRPL40-201ENST00000333130 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.75■□□□□ 0.91
MRPL40-201ENST00000333130 FAM47DPA6NHR8 397 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 HACD1B0YJ81 288 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 CEP104O60308 925 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 XPAP23025 273 aaPredicted RBP20.75■□□□□ 0.91
MRPL40-201ENST00000333130 CES1P23141 567 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 ACSL1P33121 698 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 PLA2G5P39877 138 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 ADPRHP54922 357 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 BCL2L1Q07817 233 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 ITKQ08881 620 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 SIX1Q15475 284 aaPredicted RBP20.75■□□□□ 0.91
MRPL40-201ENST00000333130 RUBCNQ92622 972 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 RAB7BQ96AH8 199 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 HSPA12BQ96MM6 686 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 ZNF641Q96N77 438 aaPredicted RBP20.75■□□□□ 0.91
MRPL40-201ENST00000333130 QKIQ96PU8 341 aaKnown RBP eCLIP20.75■□□□□ 0.91
MRPL40-201ENST00000333130 NUDCD1Q96RS6 583 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 PHOX2BQ99453 314 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 RBM22Q9NW64 420 aaKnown RBP eCLIP20.75■□□□□ 0.91
MRPL40-201ENST00000333130 SERGEFQ9UGK8 458 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 R3HDM2Q9Y2K5 976 aaKnown RBP20.75■□□□□ 0.91
MRPL40-201ENST00000333130 OTOGLQ3ZCN5 2332 aa20.75■□□□□ 0.91
MRPL40-201ENST00000333130 DMDP11532 3685 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms