RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 BBOF1Q8ND07 529 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 CADM4Q8NFZ8 388 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 PCDH19Q8TAB3 1148 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 CEP76Q8TAP6 659 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 WFDC5Q8TCV5 224 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 CYB5D2Q8WUJ1 264 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 RLN3Q8WXF3 142 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 P3H4Q92791 437 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 HAUS1Q96CS2 278 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 LMLNQ96KR4 655 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 RTKNQ9BST9 563 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 C2orf49Q9BVC5 232 aaPredicted RBP9.93□□□□□ -0.82
SYN3-201ENST00000332840 MKRN2Q9H000 416 aaKnown RBP9.93□□□□□ -0.82
SYN3-201ENST00000332840 SIK2Q9H0K1 926 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 VIPAS39Q9H9C1 493 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 ITM2CQ9NQX7 267 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 WHRNQ9P202 907 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 MTRF1LQ9UGC7 380 aaKnown RBP9.93□□□□□ -0.82
SYN3-201ENST00000332840 SUSD2Q9UGT4 822 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 EVLQ9UI08 416 aaPredicted RBP9.93□□□□□ -0.82
SYN3-201ENST00000332840 VPS28Q9UK41 221 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 INVSQ9Y283 1065 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 TBC1D30Q9Y2I9 924 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 DSPP15924 2871 aaKnown RBP9.93□□□□□ -0.82
SYN3-201ENST00000332840 ASPMQ8IZT6 3477 aa9.93□□□□□ -0.82
SYN3-201ENST00000332840 FASNP49327 2511 aaKnown RBP9.93□□□□□ -0.82
SYN3-201ENST00000332840 KIAA1549LQ6ZVL6 1849 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 IGLV3-10A0A075B6K4 115 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 EDDM13A0A1B0GTR0 161 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 DNTTP04053 509 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 RBP3P10745 1247 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 GNSP15586 552 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 BCKDHBP21953 392 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 STIP1P31948 543 aaKnown RBP9.92□□□□□ -0.82
SYN3-201ENST00000332840 RPL21P46778 160 aaKnown RBP9.92□□□□□ -0.82
SYN3-201ENST00000332840 HCAR3P49019 387 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 NR2C2P49116 596 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 TPMTP51580 245 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 COPAP53621 1224 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 NRG1Q02297 640 aaPredicted RBP9.92□□□□□ -0.82
SYN3-201ENST00000332840 CAV1Q03135 178 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 ELAVL3Q14576 367 aaKnown RBP9.92□□□□□ -0.82
SYN3-201ENST00000332840 NOMO1Q15155 1222 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 CCDC6Q16204 474 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 FSCBQ5H9T9 825 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 ZNF776Q68DI1 518 aaPredicted RBP9.92□□□□□ -0.82
SYN3-201ENST00000332840 CXorf57Q6NSI4 855 aaKnown RBP9.92□□□□□ -0.82
SYN3-201ENST00000332840 ZNF783Q6ZMS7 281 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 BZW1Q7L1Q6 419 aaKnown RBP9.92□□□□□ -0.82
SYN3-201ENST00000332840 TMEFF1Q8IYR6 380 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 MREGQ8N565 214 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 PQLC3Q8N755 202 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 PLD5Q8N7P1 536 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 LRRC45Q96CN5 670 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 MYEOVQ96EZ4 313 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 SNF8Q96H20 258 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 CSPG4P5Q96PW8 444 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 FMO2Q99518 471 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 FAM118BQ9BPY3 351 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 NUSAP1Q9BXS6 441 aaKnown RBP9.92□□□□□ -0.82
SYN3-201ENST00000332840 MUC3BQ9H195 1237 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 PRSS16Q9NQE7 514 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 DONSONQ9NYP3 566 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 GRHL1Q9NZI5 618 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 CWC15Q9P013 229 aaKnown RBP9.92□□□□□ -0.82
SYN3-201ENST00000332840 PPARGC1AQ9UBK2 798 aaKnown RBP9.92□□□□□ -0.82
SYN3-201ENST00000332840 MBD1Q9UIS9 605 aaPredicted RBP9.92□□□□□ -0.82
SYN3-201ENST00000332840 SLC25A13Q9UJS0 675 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 INTS6Q9UL03 887 aaKnown RBP9.92□□□□□ -0.82
SYN3-201ENST00000332840 TPX2Q9ULW0 747 aaKnown RBP9.92□□□□□ -0.82
SYN3-201ENST00000332840 CYP8B1Q9UNU6 501 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 ERVW-1Q9UQF0 538 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 NEU2Q9Y3R4 380 aa9.92□□□□□ -0.82
SYN3-201ENST00000332840 CXorf51AA0A1B0GTR3 108 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 CFAP69A5D8W1 941 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 DRGXA6NNA5 263 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 E9PAM4 449 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 H7C0C1 242 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 EEF2KO00418 725 aaKnown RBP9.91□□□□□ -0.82
SYN3-201ENST00000332840 SLC30A4O14863 429 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 SASH3O75995 380 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 RHOCP08134 193 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 FAM153BP0C7A2 387 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 HLA-EP13747 358 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 PECAM1P16284 738 aaPredicted RBP9.91□□□□□ -0.82
SYN3-201ENST00000332840 GOT1P17174 413 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 AMPD1P23109 780 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 ECHS1P30084 290 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 HSPA9P38646 679 aaKnown RBP9.91□□□□□ -0.82
SYN3-201ENST00000332840 ADCY8P40145 1251 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 ATP5OP48047 213 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 PLTPP55058 493 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 ZNF33AQ06730 810 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 GPS2Q13227 327 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 XRCC4Q13426 336 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 FAM153CQ494X1 144 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 PEAR1Q5VY43 1037 aaPredicted RBP9.91□□□□□ -0.82
SYN3-201ENST00000332840 IL31Q6EBC2 164 aa9.91□□□□□ -0.82
SYN3-201ENST00000332840 DARS2Q6PI48 645 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms