RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 CCNYQ8ND76 341 aa16.6■□□□□ 0.25
C11orf88-201ENST00000332814 FAM131CQ96AQ9 280 aa16.6■□□□□ 0.25
C11orf88-201ENST00000332814 TUBGCP5Q96RT8 1024 aa16.6■□□□□ 0.25
C11orf88-201ENST00000332814 ATP13A3Q9H7F0 1226 aa16.6■□□□□ 0.25
C11orf88-201ENST00000332814 SALL4Q9UJQ4 1053 aa16.6■□□□□ 0.25
C11orf88-201ENST00000332814 CDV3Q9UKY7 258 aaKnown RBP16.6■□□□□ 0.25
C11orf88-201ENST00000332814 HEY1Q9Y5J3 304 aa16.6■□□□□ 0.25
C11orf88-201ENST00000332814 CHD5Q8TDI0 1954 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 C16orf96A6NNT2 1141 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 KRT86O43790 486 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 IGHV4-34P06331 123 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 SYPP08247 313 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 CCDC175P0C221 793 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 SDHBP21912 280 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 NUDT1P36639 197 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 MMP13P45452 471 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 CSNK1DP48730 415 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 SCNN1BP51168 640 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 AP1S1P61966 158 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 GBE1Q04446 702 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 ITKQ08881 620 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 SLC45A4Q5BKX6 768 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 NEK5Q6P3R8 708 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 SLC23A3Q6PIS1 610 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 MFSD7Q6UXD7 560 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 SPOCD1Q6ZMY3 1216 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 PEX26Q7Z412 305 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 SRLQ86TD4 932 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 LRRC8AQ8IWT6 810 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 TSEN2Q8NCE0 465 aaKnown RBP16.59■□□□□ 0.25
C11orf88-201ENST00000332814 NETO1Q8TDF5 533 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 RAB7BQ96AH8 199 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 SKA1Q96BD8 255 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 PSKH2Q96QS6 385 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 CPEB1Q9BZB8 566 aaKnown RBP16.59■□□□□ 0.25
C11orf88-201ENST00000332814 AASDHPPTQ9NRN7 309 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 ADGRG1Q9Y653 693 aa16.59■□□□□ 0.25
C11orf88-201ENST00000332814 A0A1W2PPC4 97 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 LNP1A1A4G5 178 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 CCDC66A2RUB6 948 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 C3orf70A6NLC5 250 aaPredicted RBP16.58■□□□□ 0.24
C11orf88-201ENST00000332814 PPP1R12AO14974 1030 aaPredicted RBP16.58■□□□□ 0.24
C11orf88-201ENST00000332814 INSIG1O15503 277 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 RNGTTO60942 597 aaKnown RBP16.58■□□□□ 0.24
C11orf88-201ENST00000332814 PIGNO95427 931 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 PTMAP06454 111 aaKnown RBP16.58■□□□□ 0.24
C11orf88-201ENST00000332814 CCNCP24863 283 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 MAT2AP31153 395 aaKnown RBP16.58■□□□□ 0.24
C11orf88-201ENST00000332814 CTNNA1P35221 906 aaKnown RBP16.58■□□□□ 0.24
C11orf88-201ENST00000332814 AFF3P51826 1226 aaKnown RBP16.58■□□□□ 0.24
C11orf88-201ENST00000332814 PPP2CBP62714 309 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 PPP2CAP67775 309 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 IRX4P78413 519 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 BCL2L1Q07817 233 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 NSUN2Q08J23 767 aaKnown RBP eCLIP16.58■□□□□ 0.24
C11orf88-201ENST00000332814 PDK1Q15118 436 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 SETMARQ53H47 684 aaPredicted RBP16.58■□□□□ 0.24
C11orf88-201ENST00000332814 TFDP3Q5H9I0 405 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 CCDC181Q5TID7 509 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 KAZNQ674X7 775 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 SLC9A4Q6AI14 798 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 BZW1Q7L1Q6 419 aaKnown RBP16.58■□□□□ 0.24
C11orf88-201ENST00000332814 TTC7BQ86TV6 843 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 TRIM69Q86WT6 500 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 CCDC13Q8IYE1 715 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 PLD5Q8N7P1 536 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 EXD1Q8NHP7 514 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 HDAC11Q96DB2 347 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 ZNF641Q96N77 438 aaPredicted RBP16.58■□□□□ 0.24
C11orf88-201ENST00000332814 GTPBP2Q9BX10 602 aaKnown RBP16.58■□□□□ 0.24
C11orf88-201ENST00000332814 SCUBE2Q9NQ36 999 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 DTLQ9NZJ0 730 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 TRIM10Q9UDY6 481 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 AMFRQ9UKV5 643 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 TTLL3Q9Y4R7 772 aa16.58■□□□□ 0.24
C11orf88-201ENST00000332814 SPAG17Q6Q759 2223 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.57■□□□□ 0.24
C11orf88-201ENST00000332814 A0A1W2PQU0 124 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 GRID2IPA4D2P6 1211 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 RNF103O00237 685 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 MATN3O15232 486 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 ENGP17813 658 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 CDKN2BP42772 138 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 RGRP47804 291 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 MARCKSL1P49006 195 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 RWDD2BP57060 319 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 TAS2R38P59533 333 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 HNRNPDQ14103 355 aaKnown RBP16.57■□□□□ 0.24
C11orf88-201ENST00000332814 KIAA1161Q6NSJ0 714 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 HORMAD1Q86X24 394 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 UBL4BQ8N7F7 174 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 KRT35Q92764 455 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 FEM1CQ96JP0 617 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 SUV39H2Q9H5I1 410 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 TM9SF3Q9HD45 589 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 NT5MQ9NPB1 228 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 TMEM9BQ9NQ34 198 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 DKK3Q9UBP4 350 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 DMTF1Q9Y222 760 aa16.57■□□□□ 0.24
C11orf88-201ENST00000332814 MIF4GDA9UHW6 222 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms