RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 NME5P56597 212 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 OSTNP61366 133 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 IRF9Q00978 393 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 ARL13AQ5H913 290 aaPredicted RBP18.34■□□□□ 0.53
PKP3-201ENST00000331563 OFCC1Q8IZS5 231 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 CNTD1Q8N815 330 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 TANKQ92844 425 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 SLCO4A1Q96BD0 722 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 ADI1Q9BV57 179 aa18.34■□□□□ 0.53
PKP3-201ENST00000331563 TDRD1Q9BXT4 1180 aaKnown RBP18.34■□□□□ 0.53
PKP3-201ENST00000331563 UPF3AQ9H1J1 476 aaKnown RBP18.34■□□□□ 0.53
PKP3-201ENST00000331563 SUCOQ9UBS9 1254 aaKnown RBP18.34■□□□□ 0.53
PKP3-201ENST00000331563 A0A096LPK6 155 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 TCAF2A6NFQ2 919 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 H0YCG3 227 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 ENO2P09104 434 aaPredicted RBP18.33■□□□□ 0.53
PKP3-201ENST00000331563 ARL2P36404 184 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 GP5P40197 560 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 NFATC3Q12968 1075 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 RFTN1Q14699 578 aaPredicted RBP18.33■□□□□ 0.53
PKP3-201ENST00000331563 PDK2Q15119 407 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 DLG2Q15700 870 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 ZNF618Q5T7W0 954 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 SLFN12LQ6IEE8 588 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 PPP4R4Q6NUP7 873 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 USP43Q70EL4 1123 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 CDKL3Q8IVW4 592 aaPredicted RBP18.33■□□□□ 0.53
PKP3-201ENST00000331563 PDZD8Q8NEN9 1154 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 CALML6Q8TD86 181 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 ACDQ96AP0 544 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 PSD2Q9BQI7 771 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 NMRAL1Q9HBL8 299 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 SFMBT1Q9UHJ3 866 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 FIS1Q9Y3D6 152 aa18.33■□□□□ 0.53
PKP3-201ENST00000331563 G3V2L1 256 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 MED7O43513 233 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 SNAP91O60641 907 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 TPSB2P20231 275 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 TGM2P21980 687 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 RAP1GAPP47736 663 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 GRIA4P48058 902 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 OXA1LQ15070 435 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 TPSAB1Q15661 275 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 WDR45BQ5MNZ6 344 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 ILDR2Q71H61 639 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 IGFN1Q86VF2 1251 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 TTC30AQ86WT1 665 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 RNF149Q8NC42 400 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 ZC3H15Q8WU90 426 aaKnown RBP18.33■□□□□ 0.52
PKP3-201ENST00000331563 RXFP2Q8WXD0 754 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 TCF12Q99081 682 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 NRBP2Q9NSY0 501 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 SEPT3Q9UH03 358 aa18.33■□□□□ 0.52
PKP3-201ENST00000331563 FAM149AA5PLN7 773 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 FAM155AB1AL88 458 aaPredicted RBP18.32■□□□□ 0.52
PKP3-201ENST00000331563 PDHXO00330 501 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 CLOCKO15516 846 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 RSL1D1O76021 490 aaKnown RBP18.32■□□□□ 0.52
PKP3-201ENST00000331563 JUNP05412 331 aaKnown RBP18.32■□□□□ 0.52
PKP3-201ENST00000331563 GRIA3P42263 894 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 YAP1P46937 504 aaKnown RBP18.32■□□□□ 0.52
PKP3-201ENST00000331563 NAGLUP54802 743 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 TFAMQ00059 246 aaKnown RBP18.32■□□□□ 0.52
PKP3-201ENST00000331563 TARBP2Q15633 366 aaKnown RBP18.32■□□□□ 0.52
PKP3-201ENST00000331563 ZNF699Q32M78 642 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 EML3Q32P44 896 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 CELF3Q5SZQ8 465 aaKnown RBP18.32■□□□□ 0.52
PKP3-201ENST00000331563 FRA10AC1Q70Z53 315 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 ZNF354CQ86Y25 554 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 CAMK1DQ8IU85 385 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 CPSF7Q8N684 471 aaKnown RBP18.32■□□□□ 0.52
PKP3-201ENST00000331563 ATP6V0D2Q8N8Y2 350 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 LILRB4Q8NHJ6 448 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 PCDH19Q8TAB3 1148 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 ZDHHC2Q9UIJ5 367 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 PCDHGA7Q9Y5G6 932 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 TTC34A8MYJ7 566 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 GUCY1B2O75343 617 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 ALDH1A2O94788 518 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 KCNH1O95259 989 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 SLC25A27O95847 323 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 GPD1P21695 349 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 CLCN3P51790 818 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 MERTKQ12866 999 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 SCYL1Q96KG9 808 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 HES2Q9Y543 173 aa18.32■□□□□ 0.52
PKP3-201ENST00000331563 DNAJC25-GNG10A0A024R161 153 aa18.31■□□□□ 0.52
PKP3-201ENST00000331563 ZBTB42B2RXF5 422 aa18.31■□□□□ 0.52
PKP3-201ENST00000331563 SLC22A2O15244 555 aa18.31■□□□□ 0.52
PKP3-201ENST00000331563 PAPSS1O43252 624 aaPredicted RBP18.31■□□□□ 0.52
PKP3-201ENST00000331563 TIMM44O43615 452 aa18.31■□□□□ 0.52
PKP3-201ENST00000331563 EEF1DP29692 281 aaKnown RBP18.31■□□□□ 0.52
PKP3-201ENST00000331563 GTF2A2P52657 109 aa18.31■□□□□ 0.52
PKP3-201ENST00000331563 ADAM17P78536 824 aa18.31■□□□□ 0.52
PKP3-201ENST00000331563 HERC3Q15034 1050 aa18.31■□□□□ 0.52
PKP3-201ENST00000331563 LDLRAD1Q5T700 205 aa18.31■□□□□ 0.52
PKP3-201ENST00000331563 HEATR6Q6AI08 1181 aaKnown RBP18.31■□□□□ 0.52
PKP3-201ENST00000331563 STRA8Q7Z7C7 330 aa18.31■□□□□ 0.52
PKP3-201ENST00000331563 CANT1Q8WVQ1 401 aa18.31■□□□□ 0.52
PKP3-201ENST00000331563 FBXL20Q96IG2 436 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms