RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 DSC2Q02487 901 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 RAD51Q06609 339 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 BYSLQ13895 437 aaKnown RBP16.24■□□□□ 0.19
LRRC28-202ENST00000331450 GRM3Q14832 879 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 CYP1B1Q16678 543 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 ARSIQ5FYB1 569 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 FAM46CQ5VWP2 391 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 LONP2Q86WA8 852 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 ZNF567Q8N184 647 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 RYBPQ8N488 228 aaPredicted RBP16.24■□□□□ 0.19
LRRC28-202ENST00000331450 C12orf50Q8NA57 414 aaPredicted RBP16.24■□□□□ 0.19
LRRC28-202ENST00000331450 ZBTB44Q8NCP5 570 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 PRSS33Q8NF86 280 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 RTP4Q96DX8 246 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 SEMA3CQ99985 751 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 TMEM121Q9BTD3 319 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 NOD2Q9HC29 1040 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 ITM2CQ9NQX7 267 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 HAUS2Q9NVX0 235 aa16.24■□□□□ 0.19
LRRC28-202ENST00000331450 TSPAN11A1L157 253 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 TTC24A2A3L6 582 aaPredicted RBP16.23■□□□□ 0.19
LRRC28-202ENST00000331450 KIF2AO00139 706 aaPredicted RBP16.23■□□□□ 0.19
LRRC28-202ENST00000331450 PIGNO95427 931 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 DNTTP04053 509 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 TUBB4AP04350 444 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 UGT2B4P06133 528 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 ITGAVP06756 1048 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 MMP2P08253 660 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 ITGB7P26010 798 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 CD68P34810 354 aaPredicted RBP16.23■□□□□ 0.19
LRRC28-202ENST00000331450 P2RY2P41231 377 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 SCNN1BP51168 640 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 TPMTP51580 245 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 GDF10P55107 478 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 NIPAL4Q0D2K0 466 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 MAP7D1Q3KQU3 841 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 TTC31Q49AM3 519 aaPredicted RBP16.23■□□□□ 0.19
LRRC28-202ENST00000331450 GDPD4Q6W3E5 623 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 USP30Q70CQ3 517 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 PGBD3Q8N328 593 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 SPOCK2Q92563 424 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 ARRDC3Q96B67 414 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 TADA1Q96BN2 335 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 ECHDC3Q96DC8 303 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 AGAP3Q96P47 875 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 PRRX2Q99811 253 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 GLOD4Q9HC38 313 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 SCUBE2Q9NQ36 999 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 HOMER3Q9NSC5 361 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 SERGEFQ9UGK8 458 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 TRHDEQ9UKU6 1024 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 FZD4Q9ULV1 537 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 LRRK1Q38SD2 2015 aa16.23■□□□□ 0.19
LRRC28-202ENST00000331450 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.22■□□□□ 0.19
LRRC28-202ENST00000331450 C5orf60A6NFR6 353 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 KPNA3O00505 521 aaPredicted RBP16.22■□□□□ 0.19
LRRC28-202ENST00000331450 TRAFD1O14545 582 aaPredicted RBP16.22■□□□□ 0.19
LRRC28-202ENST00000331450 SOCS5O75159 536 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 ZNF217O75362 1048 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 NEBLO76041 1014 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 NFKB1P19838 968 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 CES1P23141 567 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 TCF15Q12870 199 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 SNX1Q13596 522 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 SLC14A2Q15849 920 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 ZNF805Q5CZA5 627 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 PARS2Q7L3T8 475 aaKnown RBP16.22■□□□□ 0.19
LRRC28-202ENST00000331450 IMP4Q96G21 291 aaKnown RBP16.22■□□□□ 0.19
LRRC28-202ENST00000331450 PPP1R16AQ96I34 528 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 CAPZA3Q96KX2 299 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 ZNF641Q96N77 438 aaPredicted RBP16.22■□□□□ 0.19
LRRC28-202ENST00000331450 SPATA13Q96N96 652 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 KLHL32Q96NJ5 620 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 FERMT1Q9BQL6 677 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 AP1M1Q9BXS5 423 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 SLC25A51Q9H1U9 297 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 GBA3Q9H227 469 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 ATP13A3Q9H7F0 1226 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 ZSCAN32Q9NX65 697 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 KLHL8Q9P2G9 620 aaPredicted RBP16.22■□□□□ 0.19
LRRC28-202ENST00000331450 DKK3Q9UBP4 350 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 RNF14Q9UBS8 474 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 DRG1Q9Y295 367 aaKnown RBP16.22■□□□□ 0.19
LRRC28-202ENST00000331450 TTLL3Q9Y4R7 772 aa16.22■□□□□ 0.19
LRRC28-202ENST00000331450 IGHV1OR15-9A0A0B4J2B8 117 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 A0A1W2PP55 124 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 PDE2AO00408 941 aaPredicted RBP16.21■□□□□ 0.19
LRRC28-202ENST00000331450 HTRA2O43464 458 aaPredicted RBP16.21■□□□□ 0.19
LRRC28-202ENST00000331450 OPHN1O60890 802 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 LILRB5O75023 590 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 ACADMP11310 421 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 SERPINA4P29622 427 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 SKOR1P84550 965 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 BCL2L1Q07817 233 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 ITKQ08881 620 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 CNTN1Q12860 1018 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 TRAF2Q12933 501 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 POM121L1PQ3SYA9 428 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 ANKRD20A2Q5SQ80 823 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 PIP5KL1Q5T9C9 394 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms