RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 CMTR2Q8IYT2 770 aaKnown RBP12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CKAP2Q8WWK9 683 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 XPR1Q9UBH6 696 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 GIT1Q9Y2X7 761 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SAGE2PA6NJ88 616 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CBX5P45973 191 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CD83Q01151 205 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 TGM3Q08188 693 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 HAGHLQ6PII5 290 aaPredicted RBP12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SLC25A23Q9BV35 468 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CDHR5Q9HBB8 845 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 GDF3Q9NR23 364 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SAE1Q9UBE0 346 aaPredicted RBP12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 NDOR1Q9UHB4 597 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 DBIP07108 87 aaKnown RBP12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CYP2C9P11712 490 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 TYMPP19971 482 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 RPL14P50914 215 aaKnown RBP12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 BAATQ14032 418 aaPredicted RBP12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 TRIM40Q6P9F5 258 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ZNF433Q8N7K0 673 aaPredicted RBP12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 TNFAIP8L1Q8WVP5 186 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 FCRL4Q96PJ5 515 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 NAT9Q9BTE0 207 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CATSPERZQ9NTU4 200 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 MTF2Q9Y483 593 aaPredicted RBP12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 TAF6LQ9Y6J9 622 aa12.87□□□□□ -0.35
RAB11FIP1-202ENST00000330843 MAFKO60675 156 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PSKH1P11801 424 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 IL1R1P14778 569 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 QPCTQ16769 361 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 HKDC1Q2TB90 917 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ZNF549Q6P9A3 640 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 LPCAT1Q8NF37 534 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 DIRAS2Q96HU8 199 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PCDH9Q9HC56 1237 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ZNF609O15014 1411 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PSMD9O00233 223 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 UQCRBP14927 111 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 STRIP1Q5VSL9 837 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 REPS1Q96D71 796 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 DNAJC1Q96KC8 554 aaKnown RBP12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ALDH8A1Q9H2A2 487 aaPredicted RBP12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ARHGAP20Q9P2F6 1191 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 DHRS12A0PJE2 317 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 OR6C70A6NIJ9 312 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SNX3O60493 162 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 LINC00032P0C843 101 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 RPL35P42766 123 aaKnown RBP12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 MTHFRP42898 656 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ERVK-9P63128 1117 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 LRRC70Q7Z2Q7 622 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 HDDC3Q8N4P3 179 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SCAIQ8N9R8 606 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 GSTCDQ8NEC7 633 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 FBXO32Q969P5 355 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PTCD3Q96EY7 689 aaKnown RBP12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CLPTM1LQ96KA5 538 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SLAIN2Q9P270 581 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 TEX14Q8IWB6 1497 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PZPP20742 1482 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 HEG1Q9ULI3 1381 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ZNF234Q14588 700 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 NLGN1Q8N2Q7 840 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 RAD51AP1Q96B01 352 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 MTMR8Q96EF0 704 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PADI2Q9Y2J8 665 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CACNA1FO60840 1977 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 VPS4BO75351 444 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PGAM1P18669 254 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PIK3CGP48736 1102 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 EDEM1Q92611 657 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 DPF3Q92784 378 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 NKD1Q969G9 470 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 MSANTD3Q96H12 275 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 MAT2BQ9NZL9 334 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 MYH3P11055 1940 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PCDH8O95206 1070 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 IFNA6P05013 189 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 RARAP10276 462 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 GRIA4P48058 902 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 NAB1Q13506 487 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 TOR1AIP1Q5JTV8 583 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CHCHD4Q8N4Q1 142 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 OR2L5Q8NG80 312 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 VPS28Q9UK41 221 aa12.86□□□□□ -0.35
RAB11FIP1-202ENST00000330843 TSPOAP1O95153 1857 aa12.85□□□□□ -0.35
RAB11FIP1-202ENST00000330843 A0A087X1B8 175 aa12.85□□□□□ -0.35
RAB11FIP1-202ENST00000330843 C15orf38-AP3S2A0A0A6YYH1 394 aa12.85□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ABHD14A-ACY1A0A1B0GW23 586 aa12.85□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SLC37A4O43826 429 aa12.85□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SERPINF2P08697 491 aa12.85□□□□□ -0.35
RAB11FIP1-202ENST00000330843 VARSP26640 1264 aaKnown RBP12.85□□□□□ -0.35
RAB11FIP1-202ENST00000330843 UGT2B15P54855 530 aa12.85□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SWT1Q5T5J6 900 aaKnown RBP12.85□□□□□ -0.35
RAB11FIP1-202ENST00000330843 TTC23Q5W5X9 447 aa12.85□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CRELD2Q6UXH1 353 aaPredicted RBP12.85□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ARPINQ7Z6K5 226 aa12.85□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ADAM32Q8TC27 787 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms