RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 C2CD4BA6NLJ0 364 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 SIGLEC16A6NMB1 481 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 C4orf47A7E2U8 309 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 PATE3B3GLJ2 98 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 MCF2LO15068 1137 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 EPHB6O15197 1021 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 BCAT2O15382 392 aaPredicted RBP6.48□□□□□ -1.37
SMG1-201ENST00000330588 YKT6O15498 198 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 OPHN1O60890 802 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 GRAP2O75791 330 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ADCY5O95622 1261 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 SEMA4FO95754 770 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 WNT11O96014 354 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 GZMAP12544 262 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 HLA-EP13747 358 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 PDGFRAP16234 1089 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 GOT1P17174 413 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 DESP17661 470 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 CD27P26842 260 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 SDC4P31431 198 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 FLT3P36888 993 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 PRKCIP41743 596 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 MAPKAPK2P49137 400 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 AFF3P51826 1226 aaKnown RBP6.48□□□□□ -1.37
SMG1-201ENST00000330588 ZNF135P52742 658 aaPredicted RBP6.48□□□□□ -1.37
SMG1-201ENST00000330588 NME3Q13232 169 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 CCDC6Q16204 474 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 DCAF12L1Q5VU92 463 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 TAF3Q5VWG9 929 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 FAM46CQ5VWP2 391 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 HGSNATQ68CP4 663 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 TCEAL6Q6IPX3 200 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 DBX2Q6ZNG2 339 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 CFAP52Q8N1V2 620 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 SH2D3CQ8N5H7 860 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 AOPEPQ8N6M6 819 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 FRMD1Q8N878 549 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 OR2T34Q8NGX1 318 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 CPA5Q8WXQ8 436 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 OR8D1Q8WZ84 308 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ANP32BQ92688 251 aaKnown RBP6.48□□□□□ -1.37
SMG1-201ENST00000330588 PTPRN2Q92932 1015 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 TCEAL3Q969E4 200 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 IGSF8Q969P0 613 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ISG20Q96AZ6 181 aaKnown RBP6.48□□□□□ -1.37
SMG1-201ENST00000330588 FRMD6Q96NE9 622 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 SYT11Q9BT88 431 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 GPR174Q9BXC1 333 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 TMPRSS13Q9BYE2 586 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 CEP44Q9C0F1 390 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 SLC6A17Q9H1V8 727 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 NLRC4Q9NPP4 1024 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 DONSONQ9NYP3 566 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 AIPL1Q9NZN9 384 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ZNF212Q9UDV6 495 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 VTI1BQ9UEU0 232 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.48□□□□□ -1.37
SMG1-201ENST00000330588 GPR179Q6PRD1 2367 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ZFHX2Q9C0A1 2572 aaPredicted RBP6.48□□□□□ -1.37
SMG1-201ENST00000330588 CHD5Q8TDI0 1954 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ABCA7Q8IZY2 2146 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 A0A1W2PQJ5 194 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ANKRD62A6NC57 917 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 LRRC72A6NJI9 287 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 E9PAM4 449 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 C1QTNF3-AMACRE9PGA6 284 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 LATO43561 262 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 RRP9O43818 475 aaKnown RBP6.48□□□□□ -1.37
SMG1-201ENST00000330588 TRIM16O95361 564 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 CFIP05156 583 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 KRT3P12035 628 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ATP1A3P13637 1013 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ADRA1BP35368 520 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ZNF165P49910 485 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ATXN3P54252 364 aaPredicted RBP6.48□□□□□ -1.37
SMG1-201ENST00000330588 RACK1P63244 317 aaKnown RBP6.48□□□□□ -1.37
SMG1-201ENST00000330588 TPM4P67936 248 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 C19orf57Q0VDD7 668 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 OVGP1Q12889 678 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 TSNAXIP1Q2TAA8 658 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 ANO6Q4KMQ2 910 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 KIAA0895LQ68EN5 471 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 TRNP1Q6NT89 227 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 NEK5Q6P3R8 708 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 LRSAM1Q6UWE0 723 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 MMS22LQ6ZRQ5 1243 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 VN1R5Q7Z5H4 357 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 GLRX5Q86SX6 157 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 TRIM69Q86WT6 500 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 DHX40Q8IX18 779 aaKnown RBP6.48□□□□□ -1.37
SMG1-201ENST00000330588 APCDD1Q8J025 514 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 HDDC3Q8N4P3 179 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 MINDY1Q8N5J2 469 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 TMIEQ8NEW7 156 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 FNIP1Q8TF40 1166 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 SLC20A1Q8WUM9 679 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 CASKIN2Q8WXE0 1202 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 SYN2Q92777 582 aaPredicted RBP6.48□□□□□ -1.37
SMG1-201ENST00000330588 SKA1Q96BD8 255 aa6.48□□□□□ -1.37
SMG1-201ENST00000330588 CRELD1Q96HD1 420 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms