RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 BHLHE22Q8NFJ8 381 aaPredicted RBP15.54■□□□□ 0.08
BRCC3-201ENST00000330045 IPMKQ8NFU5 416 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 Q9H521 79 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 COPG1Q9Y678 874 aaKnown RBP15.54■□□□□ 0.08
BRCC3-201ENST00000330045 MKI67P46013 3256 aaKnown RBP15.54■□□□□ 0.08
BRCC3-201ENST00000330045 MEIS3P2A8K0S8 358 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 ANXA9O76027 345 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 ARCN1P48444 511 aaKnown RBP15.54■□□□□ 0.08
BRCC3-201ENST00000330045 PSEN2P49810 448 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 TSTD2Q5T7W7 516 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 MFSD6LQ8IWD5 586 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 CATSPER1Q8NEC5 780 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 PPHLN1Q8NEY8 458 aaKnown RBP15.54■□□□□ 0.08
BRCC3-201ENST00000330045 SMARCD1Q96GM5 515 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 FCRL5Q96RD9 977 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 MRPL46Q9H2W6 279 aaKnown RBP15.54■□□□□ 0.08
BRCC3-201ENST00000330045 COPS7BQ9H9Q2 264 aaPredicted RBP15.54■□□□□ 0.08
BRCC3-201ENST00000330045 VCX3AQ9NNX9 186 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 SLC38A7Q9NVC3 462 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 RIMS3Q9UJD0 308 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 CDH9Q9ULB4 789 aa15.54■□□□□ 0.08
BRCC3-201ENST00000330045 STX16-NPEPL1H3BU86 382 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 CA12O43570 354 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 NPHS1O60500 1241 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 DNAJA2O60884 412 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 FLT3LGP49771 235 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 CLCNKBP51801 687 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 PRKCZQ05513 592 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 DYNC1I2Q13409 638 aaKnown RBP15.53■□□□□ 0.08
BRCC3-201ENST00000330045 RFTN1Q14699 578 aaPredicted RBP15.53■□□□□ 0.08
BRCC3-201ENST00000330045 DENND5AQ6IQ26 1287 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 DLG3Q92796 817 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 ELMO2Q96JJ3 720 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 FICDQ9BVA6 458 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 RHOBTB2Q9BYZ6 727 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 UNKQ9C0B0 810 aaKnown RBP15.53■□□□□ 0.08
BRCC3-201ENST00000330045 UBE2OQ9C0C9 1292 aaKnown RBP15.53■□□□□ 0.08
BRCC3-201ENST00000330045 SIK2Q9H0K1 926 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 OSBPL2Q9H1P3 480 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 GLOD4Q9HC38 313 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 NCKIPSDQ9NZQ3 722 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 RAB26Q9ULW5 256 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 COMMD3-BMI1R4GMX3 469 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 COL4A4P53420 1690 aaPredicted RBP15.53■□□□□ 0.08
BRCC3-201ENST00000330045 TRPC5OSA6NMA1 111 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 TMEM233B4DJY2 109 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 MYCNP04198 464 aaPredicted RBP15.53■□□□□ 0.08
BRCC3-201ENST00000330045 ARNTP27540 789 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 PMLP29590 882 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 TM4SF4P48230 202 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 INHBEP58166 350 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 FSCN1Q16658 493 aaKnown RBP15.53■□□□□ 0.08
BRCC3-201ENST00000330045 SH2D4BQ5SQS7 431 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 POTEHQ6S545 545 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 SATL1Q86VE3 508 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 ATPAF2Q8N5M1 289 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 ADCY4Q8NFM4 1077 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 MAELQ96JY0 434 aaKnown RBP15.53■□□□□ 0.08
BRCC3-201ENST00000330045 HAPLN3Q96S86 360 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 NPAS2Q99743 824 aa15.53■□□□□ 0.08
BRCC3-201ENST00000330045 SMIM31A0A1B0GVY4 71 aa15.52■□□□□ 0.08
BRCC3-201ENST00000330045 TCAF2A6NFQ2 919 aa15.52■□□□□ 0.08
BRCC3-201ENST00000330045 BCAS2O75934 225 aaPredicted RBP15.52■□□□□ 0.08
BRCC3-201ENST00000330045 SLC1A2P43004 574 aa15.52■□□□□ 0.08
BRCC3-201ENST00000330045 SREBF2Q12772 1141 aa15.52■□□□□ 0.08
BRCC3-201ENST00000330045 PIWIL4Q7Z3Z4 852 aaKnown RBP15.52■□□□□ 0.08
BRCC3-201ENST00000330045 CEP70Q8NHQ1 597 aa15.52■□□□□ 0.08
BRCC3-201ENST00000330045 NAT14Q8WUY8 206 aa15.52■□□□□ 0.08
BRCC3-201ENST00000330045 IRGQQ8WZA9 623 aa15.52■□□□□ 0.08
BRCC3-201ENST00000330045 TMA16Q96EY4 203 aaKnown RBP15.52■□□□□ 0.08
BRCC3-201ENST00000330045 MRPL57Q9BQC6 102 aaKnown RBP15.52■□□□□ 0.08
BRCC3-201ENST00000330045 CSNK1G1Q9HCP0 422 aa15.52■□□□□ 0.08
BRCC3-201ENST00000330045 SLC2A6Q9UGQ3 507 aa15.52■□□□□ 0.08
BRCC3-201ENST00000330045 TCAF1Q9Y4C2 921 aa15.52■□□□□ 0.08
BRCC3-201ENST00000330045 BPTFQ12830 3046 aa15.52■□□□□ 0.08
BRCC3-201ENST00000330045 HAS3O00219 553 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 SDHDO14521 159 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 PGM3O95394 542 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 CRTAMO95727 393 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 THP07101 528 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 AFF1P51825 1210 aaKnown RBP15.52■□□□□ 0.07
BRCC3-201ENST00000330045 ATXN3P54252 364 aaPredicted RBP15.52■□□□□ 0.07
BRCC3-201ENST00000330045 GEMP55040 296 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 TAS2R39P59534 338 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 CXCL17Q6UXB2 119 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 TICAM1Q8IUC6 712 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 CCDC117Q8IWD4 279 aaPredicted RBP15.52■□□□□ 0.07
BRCC3-201ENST00000330045 ARHGAP12Q8IWW6 846 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 LILRA2Q8N149 483 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 TXNDC5Q8NBS9 432 aaKnown RBP15.52■□□□□ 0.07
BRCC3-201ENST00000330045 C3orf58Q8NDZ4 430 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 DQX1Q8TE96 717 aaKnown RBP15.52■□□□□ 0.07
BRCC3-201ENST00000330045 HEXDCQ8WVB3 486 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 SOCS4Q8WXH5 440 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 SGF29Q96ES7 293 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 ZNF419Q96HQ0 510 aaPredicted RBP15.52■□□□□ 0.07
BRCC3-201ENST00000330045 IL12RB2Q99665 862 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 AP5M1Q9H0R1 490 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 POMKQ9H5K3 350 aa15.52■□□□□ 0.07
BRCC3-201ENST00000330045 UBAP1Q9NZ09 502 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms