RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 COQ4Q9Y3A0 265 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 IQANK1A0A1B0GTG1 560 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 TEX51A0A1B0GUA7 166 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 LRRIQ4A6NIV6 560 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 CENPXA8MT69 81 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 NDUFA2O43678 99 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 BCAS1O75363 584 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-201ENST00000328923 NPM3O75607 178 aaKnown RBP11.98□□□□□ -0.49
SHMT2-201ENST00000328923 SEC14L2O76054 403 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 SLITRK3O94933 977 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 GSNP06396 782 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 PGK2P07205 417 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 TMEM191BP0C7N4 346 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 ATF6P18850 670 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 EEF1B2P24534 225 aaKnown RBP11.98□□□□□ -0.49
SHMT2-201ENST00000328923 GSTM2P28161 218 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 DPP6P42658 865 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 CENPAP49450 140 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 AASDHQ4L235 1098 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-201ENST00000328923 HMBOX1Q6NT76 420 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 SPATC1Q76KD6 591 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 ZNF677Q86XU0 584 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 EID3Q8N140 333 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 UBR7Q8N806 425 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 POC5Q8NA72 575 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 OR2T34Q8NGX1 318 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 LHFPL5Q8TAF8 219 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 FBXL20Q96IG2 436 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 CNDP2Q96KP4 475 aaKnown RBP11.98□□□□□ -0.49
SHMT2-201ENST00000328923 CCDC17Q96LX7 622 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 P2RX7Q99572 595 aaKnown RBP11.98□□□□□ -0.49
SHMT2-201ENST00000328923 TUBA1CQ9BQE3 449 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 DNAI2Q9GZS0 605 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 LHPPQ9H008 270 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 LIN7BQ9HAP6 207 aa11.98□□□□□ -0.49
SHMT2-201ENST00000328923 GPBP1L1Q9HC44 474 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-201ENST00000328923 TOM1L1O75674 476 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 FAM155BO75949 473 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 CPNE6O95741 557 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 BMP3P12645 472 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 UQCRC1P31930 480 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 ARPP19P56211 112 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 HIF1AQ16665 826 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 TOR2AQ5JU69 321 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 KCNT1Q5JUK3 1230 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 FNBP1LQ5T0N5 605 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 KCTD1Q719H9 257 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 TTLL6Q8N841 843 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 XXYLT1Q8NBI6 393 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 PIWIL2Q8TC59 973 aaKnown RBP11.97□□□□□ -0.49
SHMT2-201ENST00000328923 LRRC20Q8TCA0 184 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 DCAF4Q8WV16 495 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 LPIN3Q9BQK8 851 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 C2orf40Q9H1Z8 148 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 IFT22Q9H7X7 185 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 PCDH9Q9HC56 1237 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 ITM2CQ9NQX7 267 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 CYP26B1Q9NR63 512 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 DLGAP1O14490 977 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 ACOT8O14734 319 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 PDPK1O15530 556 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 PHGDHO43175 533 aaKnown RBP11.97□□□□□ -0.49
SHMT2-201ENST00000328923 PAHP00439 452 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 SNRPAP09012 282 aaKnown RBP11.97□□□□□ -0.49
SHMT2-201ENST00000328923 BNIP2Q12982 314 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 KLF10Q13118 480 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 LAPTM5Q13571 262 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 CIAPIN1Q6FI81 312 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 CHSY3Q70JA7 882 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 ENOSF1Q7L5Y1 443 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 ZNF438Q7Z4V0 828 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 LYSMD2Q8IV50 215 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 CTAGE3PQ8IX95 158 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 LINC00518Q8N0U6 118 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 CELF2-AS1Q8N7Q2 184 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 RDH13Q8NBN7 331 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 FBXO36Q8NEA4 188 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 UROC1Q96N76 676 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 LENG8Q96PV6 779 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-201ENST00000328923 DPEP3Q9H4B8 488 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 HOMER2Q9NSB8 354 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 IL20Q9NYY1 176 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 IPO11Q9UI26 975 aaKnown RBP11.97□□□□□ -0.49
SHMT2-201ENST00000328923 NUDT5Q9UKK9 219 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 MAN2B2Q9Y2E5 1009 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 PTPRFP10586 1907 aa11.97□□□□□ -0.49
SHMT2-201ENST00000328923 CTDSP2O14595 271 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 TSPAN4O14817 238 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 RNGTTO60942 597 aaKnown RBP11.96□□□□□ -0.49
SHMT2-201ENST00000328923 MAP3K6O95382 1288 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 EGFRP00533 1210 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 PTPN7P35236 360 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 ABCG1P45844 678 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 ARHGDIAP52565 204 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 ZNF33BQ06732 778 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 IKQ13123 557 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-201ENST00000328923 YIF1BQ5BJH7 314 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 BRMS1LQ5PSV4 323 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 CATSPEREQ5SY80 951 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 GTF2IRD2BQ6EKJ0 949 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms