RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 NAT8LQ8N9F0 302 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 SLC7A14Q8TBB6 771 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 S100ZQ8WXG8 99 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 SLC10A4Q96EP9 437 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 TMEM80Q96HE8 168 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 NGLY1Q96IV0 654 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 C9orf72Q96LT7 481 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 SLITRK1Q96PX8 696 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 POP1Q99575 1024 aaKnown RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 LXNQ9BS40 222 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ABCG4Q9H172 646 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 RPRD1BQ9NQG5 326 aaKnown RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 SLC35C2Q9NQQ7 365 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 DDX28Q9NUL7 540 aaKnown RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 GABBR1Q9UBS5 961 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 VWA7Q9Y334 891 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 SNX8Q9Y5X2 465 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 A0A1W2PPM1 405 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 GSTTP1A0A1W2PQM5 241 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 LRRIQ4A6NIV6 560 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 PI4K2BG5E9Z4 385 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 PLK4O00444 970 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 DPYSL4O14531 572 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 CHADO15335 359 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ATG13O75143 517 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 SCO1O75880 301 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 IFNA14P01570 189 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 PROCP04070 461 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 SERPINB2P05120 415 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 PRKCHP24723 683 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 PIK3R1P27986 724 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ARSEP51690 589 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ARHGDIBP52566 201 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 PRKAA2P54646 552 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 RAD23AP54725 363 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 TMBIM6P55061 237 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 KIZQ2M2Z5 673 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 MTERF2Q49AM1 385 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 DCUN1D2Q6PH85 259 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 POTEAQ6S8J7 498 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 KIAA0408Q6ZU52 694 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 GSTA5Q7RTV2 222 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 GPD1LQ8N335 351 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 LRRC71Q8N4P6 559 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 SLC20A1Q8WUM9 679 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 CLEC4DQ8WXI8 215 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ZNF597Q96LX8 424 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 IL12RB2Q99665 862 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 CYP4F11Q9HBI6 524 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ALG13Q9NP73 1137 aaKnown RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ZC4H2Q9NQZ6 224 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 POLE4Q9NR33 117 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ENOPH1Q9UHY7 261 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ZNF175Q9Y473 711 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 hCG_1818297A0A087WSY0 165 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 C7orf72A4D263 438 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 USP17L15C9J2P7 530 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 USP17L13C9JLJ4 530 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 USP17L11C9JVI0 530 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 USP17L18D6R9N7 530 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 USP17L22D6RA61 530 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 USP17L17D6RBQ6 530 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 USP17L19D6RCP7 530 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 USP17L20D6RJB6 530 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 SNNO75324 88 aaPredicted RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 SLITRK5O94991 958 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 SERPINA6P08185 405 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 ZNF26P17031 533 aaPredicted RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 MAPKAPK2P49137 400 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 COPAP53621 1224 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 POU5F1BQ06416 359 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 USP17L24Q0WX57 530 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 NFIAQ12857 509 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 UBAP2LQ14157 1087 aaKnown RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 SNRNP35Q16560 246 aaKnown RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 PLA2G4EQ3MJ16 856 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 FBXO43Q4G163 708 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 ESCO2Q56NI9 601 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 TOR2AQ5JU69 321 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 ODR4Q5SWX8 454 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 STEAP4Q687X5 459 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 ERAP2Q6P179 960 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 USP17L6PQ6QN14 398 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 ZPBP2Q6X784 338 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 LILRA2Q8N149 483 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 TCP10LQ8TDR4 215 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 FAM151AQ8WW52 585 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 SNX19Q92543 992 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 FAF2Q96CS3 445 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 BTBD6Q96KE9 485 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 CNDP2Q96KP4 475 aaKnown RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 GMLQ99445 158 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 NFKBIZQ9BYH8 718 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 UBE2TQ9NPD8 197 aaPredicted RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 SEPT11Q9NVA2 429 aaKnown RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 COQ3Q9NZJ6 369 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 SIRPGQ9P1W8 387 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 WRAP73Q9P2S5 460 aaPredicted RBP6.72□□□□□ -1.33
ZNF540-201ENST00000316433 FAM8A1Q9UBU6 413 aa6.72□□□□□ -1.33
ZNF540-201ENST00000316433 SRP68Q9UHB9 627 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms