RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 IGSF6O95976 241 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 GSRP00390 522 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 UGT2B4P06133 528 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 ZFXP17010 805 aaPredicted RBP7.97□□□□□ -1.13
CDC42-201ENST00000315554 ACSL1P33121 698 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 SCNN1BP51168 640 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 SNRPD1P62314 119 aaKnown RBP7.97□□□□□ -1.13
CDC42-201ENST00000315554 RPL6Q02878 288 aaKnown RBP7.97□□□□□ -1.13
CDC42-201ENST00000315554 ITKQ08881 620 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 CNTN1Q12860 1018 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 RPS6KA1Q15418 735 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 PPP2R5EQ16537 467 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 MYLK3Q32MK0 819 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 TTC31Q49AM3 519 aaPredicted RBP7.97□□□□□ -1.13
CDC42-201ENST00000315554 INO80DQ53TQ3 878 aaPredicted RBP7.97□□□□□ -1.13
CDC42-201ENST00000315554 LRRC73Q5JTD7 316 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 ZC3H14Q6PJT7 736 aaKnown RBP7.97□□□□□ -1.13
CDC42-201ENST00000315554 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.97□□□□□ -1.13
CDC42-201ENST00000315554 BBS12Q6ZW61 710 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 DSG4Q86SJ6 1040 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 VSIG1Q86XK7 387 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 CCDC13Q8IYE1 715 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 SPACA7Q96KW9 195 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 NSMCE3Q96MG7 304 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 OMDQ99983 421 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 GPR174Q9BXC1 333 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 KCNH6Q9H252 994 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 NEUROG2Q9H2A3 272 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 ITM2CQ9NQX7 267 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 USP36Q9P275 1121 aaKnown RBP7.97□□□□□ -1.13
CDC42-201ENST00000315554 SEPT3Q9UH03 358 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 PPM1HQ9ULR3 514 aa7.97□□□□□ -1.13
CDC42-201ENST00000315554 ATXN2Q99700 1313 aaKnown RBP7.97□□□□□ -1.13
CDC42-201ENST00000315554 EML5Q05BV3 1969 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 WDFY4Q6ZS81 3184 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 CCDC163A0A0D9SF12 145 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 H7C0C1 242 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 MATN3O15232 486 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 ALOX15BO15296 676 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 NDUFS2O75306 463 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 ZNF217O75362 1048 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 NEBLO76041 1014 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 ADH1BP00325 375 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 JCHAINP01591 159 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 PRNPP04156 253 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 PRKCGP05129 697 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 HLA-DQB2P05538 268 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 ITIH2P19823 946 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 MX2P20592 715 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 C5AR1P21730 350 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 TGM2P21980 687 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 CCNCP24863 283 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 CD6P30203 668 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 CXCR5P32302 372 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 DRD3P35462 400 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 CETN2P41208 172 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 NBL1P41271 181 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 MMP13P45452 471 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 ATP5OP48047 213 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 DHPSP49366 369 aaPredicted RBP7.96□□□□□ -1.13
CDC42-201ENST00000315554 OTUD4Q01804 1114 aaKnown RBP7.96□□□□□ -1.13
CDC42-201ENST00000315554 SEMG2Q02383 582 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 ZBTB17Q13105 803 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 PDK1Q15118 436 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 CCDC6Q16204 474 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 PLK5Q496M5 336 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 SEL1L2Q5TEA6 688 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 MARC1Q5VT66 337 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 PARS2Q7L3T8 475 aaKnown RBP7.96□□□□□ -1.13
CDC42-201ENST00000315554 SRLQ86TD4 932 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 CAMK1DQ8IU85 385 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 PARP9Q8IXQ6 854 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 TMIEQ8NEW7 156 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 TRIM58Q8NG06 486 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 OR14C36Q8NHC7 312 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 ACTL9Q8TC94 416 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 NSMCE1Q8WV22 266 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 CASKIN2Q8WXE0 1202 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 P3H4Q92791 437 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 VOPP1Q96AW1 172 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 ISG20Q96AZ6 181 aaKnown RBP7.96□□□□□ -1.13
CDC42-201ENST00000315554 HDAC11Q96DB2 347 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 KLHL32Q96NJ5 620 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 ZNF599Q96NL3 588 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 OLFM3Q96PB7 478 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 TLR10Q9BXR5 811 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 DUSP15Q9H1R2 295 aaPredicted RBP7.96□□□□□ -1.13
CDC42-201ENST00000315554 C6orf106Q9H6K1 298 aaPredicted RBP7.96□□□□□ -1.13
CDC42-201ENST00000315554 FBRSQ9HAH7 460 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 RBM22Q9NW64 420 aaKnown RBP eCLIP7.96□□□□□ -1.132e-6■■■■■ 34
CDC42-201ENST00000315554 WSB2Q9NYS7 404 aaPredicted RBP7.96□□□□□ -1.13
CDC42-201ENST00000315554 GMPR2Q9P2T1 348 aaKnown RBP7.96□□□□□ -1.13
CDC42-201ENST00000315554 SMG5Q9UPR3 1016 aaKnown RBP7.96□□□□□ -1.13
CDC42-201ENST00000315554 NCKAP1Q9Y2A7 1128 aa7.96□□□□□ -1.13
CDC42-201ENST00000315554 R3HDM2Q9Y2K5 976 aaKnown RBP7.96□□□□□ -1.13
CDC42-201ENST00000315554 FAM181BA6NEQ2 426 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 APOC4-APOC2K7ER74 178 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 PPP1R12AO14974 1030 aaPredicted RBP7.95□□□□□ -1.14
CDC42-201ENST00000315554 CEP104O60308 925 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 FSBPO95073 299 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms