RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 KCNU1A8MYU2 1149 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 TRIM24O15164 1050 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 UBDO15205 165 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 GPC4O75487 556 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 SRP72O76094 671 aaKnown RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 SNRPB2P08579 225 aaKnown RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 ZNF286BP0CG31 522 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 KCNE1P15382 129 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 CD1EP15812 388 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 TCN1P20061 433 aaPredicted RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 SLC5A2P31639 672 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 AVPR1AP37288 418 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 ESRRGP62508 458 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 FASTKQ14296 549 aaKnown RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 GK3PQ14409 553 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 CYTH1Q15438 398 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 MAP7D1Q3KQU3 841 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 OLFML2BQ68BL8 750 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 FAM45BPQ6NSW5 357 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 POTEHQ6S545 545 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 GK5Q6ZS86 529 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 TRIM67Q6ZTA4 783 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 TP53INP2Q8IXH6 220 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 PACRGLQ8N7B6 248 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 SHCBP1Q8NEM2 672 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 FAM45AQ8TCE6 357 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 DIS3LQ8TF46 1054 aaKnown RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 NXNL1Q96CM4 212 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 DNAJC1Q96KC8 554 aaKnown RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 GPR78Q96P69 363 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 PGLYRP2Q96PD5 576 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 TMEM79Q9BSE2 394 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 EIF2AQ9BY44 585 aaKnown RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 TRIM15Q9C019 465 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 POMKQ9H5K3 350 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 COQ10BQ9H8M1 238 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 MEAF6Q9HAF1 191 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 WDR6Q9NNW5 1121 aaKnown RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 CACNA2D2Q9NY47 1150 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 TUBA8Q9NY65 449 aaPredicted RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 PCDHGB4Q9UN71 923 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 MAGED2Q9UNF1 606 aaPredicted RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 PCDHGB5Q9Y5G0 923 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 FAM155AB1AL88 458 aaPredicted RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 FAM72CH0Y354 149 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 H3BNH8 94 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 CACNG3O60359 315 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 BMP10O95393 424 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 JCHAINP01591 159 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 PTPN1P18031 435 aaKnown RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 CD151P48509 253 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 ATP4BP51164 291 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 INHBCP55103 352 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 ADARP55265 1226 aaKnown RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 GALNT1Q10472 559 aaPredicted RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 LRP8Q14114 963 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 MYBPC3Q14896 1274 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 FAM83EQ2M2I3 478 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 FAM72AQ5TYM5 149 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 REP15Q6BDI9 236 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 FAM72DQ6L9T8 149 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 MAMDC4Q6UXC1 1216 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 FAM72BQ86X60 149 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 HERC6Q8IVU3 1022 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 GAB3Q8WWW8 586 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 ELMO2Q96JJ3 720 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 C16orf70Q9BSU1 422 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 CXCL16Q9H2A7 254 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 CLK4Q9HAZ1 481 aaKnown RBP13.99□□□□□ -0.17
MKS1-201ENST00000313863 TRPC7Q9HCX4 862 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 CNGB3Q9NQW8 809 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 RBPJLQ9UBG7 517 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 CROTQ9UKG9 612 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 SMIM28A0A1B0GU29 152 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 DYTNA2CJ06 578 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 E7ENX8 843 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 H3BSA7 217 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 SPTLC1O15269 473 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 PGK1P00558 417 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 JUNP05412 331 aaKnown RBP13.98□□□□□ -0.17
MKS1-201ENST00000313863 IREB2P48200 963 aaKnown RBP13.98□□□□□ -0.17
MKS1-201ENST00000313863 ATXN3P54252 364 aaPredicted RBP13.98□□□□□ -0.17
MKS1-201ENST00000313863 GEMP55040 296 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 NUP107P57740 925 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 NRF1Q16656 503 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 AGKQ53H12 422 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 AGAP9Q5VTM2 703 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 PRMT9Q6P2P2 845 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 CLEC20AQ6ZU45 233 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 KIAA0408Q6ZU52 694 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 LPCAT2Q7L5N7 544 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 ERO1BQ86YB8 467 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 SLC22A9Q8IVM8 553 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 PCDH20Q8N6Y1 951 aaKnown RBP13.98□□□□□ -0.17
MKS1-201ENST00000313863 NPWQ8N729 165 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 ANKFN1Q8N957 763 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 TNIP2Q8NFZ5 429 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 ZSCAN18Q8TBC5 510 aaPredicted RBP13.98□□□□□ -0.17
MKS1-201ENST00000313863 SPPL2BQ8TCT7 592 aa13.98□□□□□ -0.17
MKS1-201ENST00000313863 LPGAT1Q92604 370 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms