RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 KCTD13Q8WZ19 329 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 CENPIQ92674 756 aaPredicted RBP8.9□□□□□ -0.98
COL6A5-202ENST00000312481 PROX1Q92786 737 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 UNC93B1Q9H1C4 597 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 ZSCAN32Q9NX65 697 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 HEATR1Q9H583 2144 aaKnown RBP8.9□□□□□ -0.98
COL6A5-202ENST00000312481 SCN7AQ01118 1682 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 CCDC182A6NF36 153 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 M0QX08 132 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 RAMP2O60895 175 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 MTTPP55157 894 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 SPP2Q13103 211 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 TAS1R2Q8TE23 839 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 HAVCR1Q96D42 359 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 ZNF607Q96SK3 696 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 SLC25A13Q9UJS0 675 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 RUVBL2Q9Y230 463 aaKnown RBP8.9□□□□□ -0.98
COL6A5-202ENST00000312481 STXBP5LQ9Y2K9 1186 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 TRUB2O95900 331 aaKnown RBP8.9□□□□□ -0.98
COL6A5-202ENST00000312481 OR56A5P0C7T3 313 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 NSUN2Q08J23 767 aaKnown RBP eCLIP8.9□□□□□ -0.98
COL6A5-202ENST00000312481 CRY2Q49AN0 593 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 INTS5Q6P9B9 1019 aaKnown RBP8.9□□□□□ -0.98
COL6A5-202ENST00000312481 VSTM1Q6UX27 236 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 RIPOR1Q6ZS17 1223 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 ZNF655Q8N720 491 aaPredicted RBP8.9□□□□□ -0.98
COL6A5-202ENST00000312481 GJD4Q96KN9 370 aaPredicted RBP8.9□□□□□ -0.98
COL6A5-202ENST00000312481 DNAJC5Q9H3Z4 198 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 DUSP10Q9Y6W6 482 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 MTCL1Q9Y4B5 1905 aaKnown RBP8.9□□□□□ -0.98
COL6A5-202ENST00000312481 KCPQ6ZWJ8 1503 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 KLHL33A6NCF5 533 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 SERPINB7O75635 380 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 ZNF33BQ06732 778 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 BAATQ14032 418 aaPredicted RBP8.9□□□□□ -0.98
COL6A5-202ENST00000312481 LRRC36Q1X8D7 754 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 TIFABQ6ZNK6 161 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 GIN1Q9NXP7 522 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 ANGPT4Q9Y264 503 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 SLC9A8Q9Y2E8 581 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 COL22A1Q8NFW1 1626 aaPredicted RBP8.9□□□□□ -0.98
COL6A5-202ENST00000312481 MRASO14807 208 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 SCELO95171 688 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 H6PDO95479 791 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 ABL1P00519 1130 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 INHBEP58166 350 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 PAMR1Q6UXH9 720 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 COLGALT1Q8NBJ5 622 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 AGAP11Q8TF27 550 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 ITCHQ96J02 903 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 CLPTM1LQ96KA5 538 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 PNMA5Q96PV4 448 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 PCBD2Q9H0N5 130 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 ABHD16BQ9H3Z7 469 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 SMPD3Q9NY59 655 aaPredicted RBP8.9□□□□□ -0.98
COL6A5-202ENST00000312481 LZTS1Q9Y250 596 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 DYRK1BQ9Y463 629 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 MYL12BO14950 172 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 BPGMP07738 259 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 TCF4P15884 667 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 BMP6P22004 513 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 YBEYP58557 167 aaPredicted RBP8.9□□□□□ -0.99
COL6A5-202ENST00000312481 DAB2P98082 770 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 CDH18Q13634 790 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 VSIG10LQ86VR7 867 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 CBWD1Q9BRT8 395 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 S100A14Q9HCY8 104 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 OSGEPQ9NPF4 335 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 ADGRE2Q9UHX3 823 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 RXRBP28702 533 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 SLC7A1P30825 629 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 GRIA2P42262 883 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 KCNJ1P48048 391 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 ZC2HC1CQ53FD0 456 aaPredicted RBP8.9□□□□□ -0.99
COL6A5-202ENST00000312481 IQSEC1Q6DN90 963 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 SYTL5Q8TDW5 730 aaPredicted RBP8.9□□□□□ -0.99
COL6A5-202ENST00000312481 ASB9Q96DX5 294 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 MYOZ2Q9NPC6 264 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 A0A0B4J269 797 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 C17orf102A2RUQ5 167 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 ITGB3P05106 788 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 CSH1P0DML2 217 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 CSH2P0DML3 217 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 PAICSP22234 425 aaKnown RBP8.9□□□□□ -0.99
COL6A5-202ENST00000312481 HNMTP50135 292 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 ATP4BP51164 291 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 LIN52Q52LA3 116 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 CCDC157Q569K6 752 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 OLFML1Q6UWY5 402 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 PRICKLE1Q96MT3 831 aaPredicted RBP8.9□□□□□ -0.99
COL6A5-202ENST00000312481 KLHL25Q9H0H3 589 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 RAVER2Q9HCJ3 691 aaKnown RBP8.9□□□□□ -0.99
COL6A5-202ENST00000312481 INTS10Q9NVR2 710 aaKnown RBP8.9□□□□□ -0.99
COL6A5-202ENST00000312481 MKLN1Q9UL63 735 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 MAN2B2Q9Y2E5 1009 aa8.9□□□□□ -0.99
COL6A5-202ENST00000312481 ATP9BO43861 1147 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 LCP1P13796 627 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 CFL1P23528 166 aaKnown RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 ZSWIM7Q19AV6 140 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 NEPROQ6NW34 567 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms