RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 ACADMP11310 421 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 C5AR1P21730 350 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 CD68P34810 354 aaPredicted RBP13.04□□□□□ -0.32
APTX-201ENST00000309615 TPMTP51580 245 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 AP1S1P61966 158 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 ZBTB16Q05516 673 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 RAD51Q06609 339 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 NIPAL4Q0D2K0 466 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 DRICH1Q6PGQ1 229 aaPredicted RBP13.04□□□□□ -0.32
APTX-201ENST00000309615 NCEH1Q6PIU2 408 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 CAMK1DQ8IU85 385 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 AADATQ8N5Z0 425 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 RLN3Q8WXF3 142 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 VAT1Q99536 393 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 PABPC3Q9H361 631 aaKnown RBP13.04□□□□□ -0.32
APTX-201ENST00000309615 KLHL8Q9P2G9 620 aaPredicted RBP13.04□□□□□ -0.32
APTX-201ENST00000309615 ZNF148Q9UQR1 794 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 ZNF318Q5VUA4 2279 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 A0A1W2PP55 124 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 C1QTNF3-AMACRE9PGA6 284 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 DNTTP04053 509 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 KCNJ1P48048 391 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 KCTD19Q17RG1 926 aaPredicted RBP13.04□□□□□ -0.32
APTX-201ENST00000309615 FAM46CQ5VWP2 391 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 GDPD4Q6W3E5 623 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 PID1Q7Z2X4 250 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 FAM160A2Q8N612 972 aaPredicted RBP13.04□□□□□ -0.32
APTX-201ENST00000309615 FRMD1Q8N878 549 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 CCDC110Q8TBZ0 833 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 ARRDC3Q96B67 414 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 LRIG1Q96JA1 1093 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 TUBGCP5Q96RT8 1024 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 FERMT1Q9BQL6 677 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 ATP13A3Q9H7F0 1226 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 HOMER3Q9NSC5 361 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 HAUS2Q9NVX0 235 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 USP36Q9P275 1121 aaKnown RBP13.04□□□□□ -0.32
APTX-201ENST00000309615 INVSQ9Y283 1065 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 PCDHGC4Q9Y5F7 938 aa13.04□□□□□ -0.32
APTX-201ENST00000309615 CCDC163A0A0D9SF12 145 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 F5H423 210 aaPredicted RBP13.03□□□□□ -0.32
APTX-201ENST00000309615 KIF2AO00139 706 aaPredicted RBP13.03□□□□□ -0.32
APTX-201ENST00000309615 TUBB4AP04350 444 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 ITGAVP06756 1048 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 MMP2P08253 660 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 NFKB1P19838 968 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 DRD3P35462 400 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 MAPK8P45983 427 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 CNTN1Q12860 1018 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 ZNF528Q3MIS6 628 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 TTC31Q49AM3 519 aaPredicted RBP13.03□□□□□ -0.32
APTX-201ENST00000309615 RALGPS1Q5JS13 557 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 ANKRD20A2Q5SQ80 823 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 ANKRD20A1Q5TYW2 823 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 ANKRD20A3Q5VUR7 823 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 TTC27Q6P3X3 843 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 FAM124AQ86V42 546 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 LONP2Q86WA8 852 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 HDDC3Q8N4P3 179 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 NELL1Q92832 810 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 MAGOHBQ96A72 148 aaKnown RBP13.03□□□□□ -0.32
APTX-201ENST00000309615 IMP4Q96G21 291 aaKnown RBP13.03□□□□□ -0.32
APTX-201ENST00000309615 KLHL32Q96NJ5 620 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 OMDQ99983 421 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 OSBPL1AQ9BXW6 950 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 GLOD4Q9HC38 313 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 ITM2CQ9NQX7 267 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 FBXL12Q9NXK8 326 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 TRHDEQ9UKU6 1024 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 CYP8B1Q9UNU6 501 aa13.03□□□□□ -0.32
APTX-201ENST00000309615 CFAP69A5D8W1 941 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 C5orf60A6NFR6 353 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 TRAFD1O14545 582 aaPredicted RBP13.02□□□□□ -0.32
APTX-201ENST00000309615 RNASEH2AO75792 299 aaKnown RBP13.02□□□□□ -0.32
APTX-201ENST00000309615 STK10O94804 968 aaKnown RBP13.02□□□□□ -0.32
APTX-201ENST00000309615 CES1P23141 567 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 ITGB7P26010 798 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 SERPINA4P29622 427 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 STIP1P31948 543 aaKnown RBP13.02□□□□□ -0.32
APTX-201ENST00000309615 CD86P42081 329 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 BCL2L1Q07817 233 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 GRM3Q14832 879 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 CYP1B1Q16678 543 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 MAP7D1Q3KQU3 841 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 ZNF805Q5CZA5 627 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 PRUNE1Q86TP1 453 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 PRPF39Q86UA1 669 aaKnown RBP13.02□□□□□ -0.32
APTX-201ENST00000309615 WDR5BQ86VZ2 330 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 SPATA22Q8NHS9 363 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 GANCQ8TET4 914 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 RTP4Q96DX8 246 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 ZNF641Q96N77 438 aaPredicted RBP13.02□□□□□ -0.32
APTX-201ENST00000309615 SPATA13Q96N96 652 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 RBM15Q96T37 977 aaKnown RBP eCLIP13.02□□□□□ -0.32
APTX-201ENST00000309615 FAM126AQ9BYI3 521 aaPredicted RBP13.02□□□□□ -0.32
APTX-201ENST00000309615 SLC25A51Q9H1U9 297 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 NEUROG2Q9H2A3 272 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 SUV39H2Q9H5I1 410 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 SCML1Q9UN30 329 aa13.02□□□□□ -0.32
APTX-201ENST00000309615 DRG1Q9Y295 367 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms