RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 EPN2O95208 641 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 CYBBP04839 570 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 TYRP14679 529 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 CPEP16870 476 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 TACR2P21452 398 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 MIPP30301 263 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 RPIAP49247 311 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 RWDD2BP57060 319 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 CDC16Q13042 620 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 AUHQ13825 339 aaKnown RBP8.4□□□□□ -1.06
CHD6-201ENST00000309279 SUZ12Q15022 739 aaKnown RBP8.4□□□□□ -1.06
CHD6-201ENST00000309279 ANO4Q32M45 955 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 KRT71Q3SY84 523 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 MPPE1Q53F39 396 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 FBXL22Q6P050 247 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 RFWD3Q6PCD5 774 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 TXNDC11Q6PKC3 985 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 TPGS1Q6ZTW0 290 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 CYP4V2Q6ZWL3 525 aaPredicted RBP8.4□□□□□ -1.06
CHD6-201ENST00000309279 GPR155Q7Z3F1 870 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 SLFN11Q7Z7L1 901 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 PSTKQ8IV42 348 aaKnown RBP8.4□□□□□ -1.06
CHD6-201ENST00000309279 ZNF683Q8IZ20 524 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 ZNF687Q8N1G0 1237 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 TXLNBQ8N3L3 684 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 PHTF2Q8N3S3 785 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 CCDC185Q8N715 623 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 COL26A1Q96A83 441 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 TMA16Q96EY4 203 aaKnown RBP8.4□□□□□ -1.06
CHD6-201ENST00000309279 MYEOVQ96EZ4 313 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 BTBD6Q96KE9 485 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 BBS2Q9BXC9 721 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 SLC2A11Q9BYW1 496 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 WDR12Q9GZL7 423 aaKnown RBP8.4□□□□□ -1.06
CHD6-201ENST00000309279 MRPL46Q9H2W6 279 aaKnown RBP8.4□□□□□ -1.06
CHD6-201ENST00000309279 TMPRSS4Q9NRS4 437 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 VPS45Q9NRW7 570 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 IL20Q9NYY1 176 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 SALL4Q9UJQ4 1053 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 FBXL21Q9UKT6 434 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 GRID1Q9ULK0 1009 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 FZD10Q9ULW2 581 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 USP18Q9UMW8 372 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 TFR2Q9UP52 801 aa8.4□□□□□ -1.06
CHD6-201ENST00000309279 MYO18AQ92614 2054 aaKnown RBP8.4□□□□□ -1.06
CHD6-201ENST00000309279 IGLV3-10A0A075B6K4 115 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 DRGXA6NNA5 263 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 NEDD8-MDP1E9PL57 170 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 F5H5T6 163 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 APOA4P06727 396 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 CISD3P0C7P0 127 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 PF4V1P10720 104 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 IL1R2P27930 398 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 HOXD9P28356 352 aaPredicted RBP8.4□□□□□ -1.07
CHD6-201ENST00000309279 OPRD1P41143 372 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 EIF1AXP47813 144 aaKnown RBP8.4□□□□□ -1.07
CHD6-201ENST00000309279 SGSHP51688 502 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 VCPP55072 806 aaKnown RBP8.4□□□□□ -1.07
CHD6-201ENST00000309279 SLC25A11Q02978 314 aaKnown RBP8.4□□□□□ -1.07
CHD6-201ENST00000309279 SEMA3BQ13214 749 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 SGCGQ13326 291 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 SPARCL1Q14515 664 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 STAT4Q14765 748 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 TMEM196Q5HYL7 178 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 KRBOX4Q5JUW0 171 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 ERMARDQ5T6L9 678 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 MANEALQ5VSG8 457 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 RAP1GAP2Q684P5 730 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 SCYL2Q6P3W7 929 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 ZNF852Q6ZMS4 543 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 TPRG1Q6ZUI0 275 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 LPCAT2Q7L5N7 544 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 C12orf40Q86WS4 652 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 GOLGA6L1Q8N7Z2 621 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 CNTD1Q8N815 330 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 GBP7Q8N8V2 638 aaPredicted RBP8.4□□□□□ -1.07
CHD6-201ENST00000309279 HJURPQ8NCD3 748 aaPredicted RBP8.4□□□□□ -1.07
CHD6-201ENST00000309279 DDI1Q8WTU0 396 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 FAM3CQ92520 227 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 NRBF2Q96F24 287 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 PRICKLE1Q96MT3 831 aaPredicted RBP8.4□□□□□ -1.07
CHD6-201ENST00000309279 XPO6Q96QU8 1125 aaKnown RBP8.4□□□□□ -1.07
CHD6-201ENST00000309279 PEBP4Q96S96 227 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 ZPBPQ9BS86 351 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 SIK2Q9H0K1 926 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 CD93Q9NPY3 652 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 DDX18Q9NVP1 670 aaKnown RBP8.4□□□□□ -1.07
CHD6-201ENST00000309279 NSMCE4AQ9NXX6 385 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 PLK2Q9NYY3 685 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 OR12D3Q9UGF7 316 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 CA14Q9ULX7 337 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 DUSP10Q9Y6W6 482 aa8.4□□□□□ -1.07
CHD6-201ENST00000309279 ZDBF2Q9HCK1 2354 aa8.39□□□□□ -1.07
CHD6-201ENST00000309279 CHD5Q8TDI0 1954 aa8.39□□□□□ -1.07
CHD6-201ENST00000309279 KANSL1LA0AUZ9 987 aa8.39□□□□□ -1.07
CHD6-201ENST00000309279 CFAP99D6REC4 459 aa8.39□□□□□ -1.07
CHD6-201ENST00000309279 ZSCAN9O15535 394 aaPredicted RBP8.39□□□□□ -1.07
CHD6-201ENST00000309279 PRPSAP2O60256 369 aa8.39□□□□□ -1.07
CHD6-201ENST00000309279 TSPAN3O60637 253 aa8.39□□□□□ -1.07
CHD6-201ENST00000309279 TULP3O75386 442 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms