RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 FGF13Q92913 245 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 PGBD4Q96DM1 585 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 ARHGEF26Q96DR7 871 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 DYDC2Q96IM9 177 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 LCORQ96JN0 433 aaPredicted RBP5.07□□□□□ -1.6
CKS1B-201ENST00000308987 CEP170P1Q96L14 293 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 IFT74Q96LB3 600 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 KXD1Q9BQD3 176 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 LXNQ9BS40 222 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 TRIM51Q9BSJ1 452 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 APOL6Q9BWW8 343 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 INO80BQ9C086 356 aaPredicted RBP5.07□□□□□ -1.6
CKS1B-201ENST00000308987 THAP2Q9H0W7 228 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 GOLPH3Q9H4A6 298 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 PPCSQ9HAB8 311 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 EBF2Q9HAK2 575 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 HAUS2Q9NVX0 235 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 MARCH2Q9P0N8 246 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 FNIP2Q9P278 1114 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 LGALS13Q9UHV8 139 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 BACE2Q9Y5Z0 518 aa5.07□□□□□ -1.6
CKS1B-201ENST00000308987 SETXQ7Z333 2677 aaKnown RBP5.07□□□□□ -1.6
CKS1B-201ENST00000308987 GCN1Q92616 2671 aaKnown RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 THADAQ6YHU6 1953 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 IGSF10Q6WRI0 2623 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CEP192Q8TEP8 1941 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 KANSL1LA0AUZ9 987 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 ARHGEF35A5YM69 484 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 AURKAO14965 403 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CCL16O15467 120 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 PPM1BO75688 479 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 GJB6O95452 261 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 NPTXRO95502 500 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 GAS8O95995 478 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 C1RP00736 705 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CYP1A1P04798 512 aaPredicted RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 ABHD2P08910 425 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 ABCB4P21439 1286 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 COMTP21964 271 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 GLRA2P23416 452 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 YWHABP31946 246 aaKnown RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 ELF1P32519 619 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 ARL2P36404 184 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CYP2J2P51589 502 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 VAMP7P51809 220 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 BPIFB4P59827 614 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 GTF2BQ00403 316 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CYP4A11Q02928 519 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CSTF1Q05048 431 aaKnown RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 PRPF4BQ13523 1007 aaKnown RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 PTK6Q13882 451 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 STAT4Q14765 748 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CRYMQ14894 314 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 RASA2Q15283 850 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 SIX1Q15475 284 aaPredicted RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 MLF2Q15773 248 aaPredicted RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 SLC5A9Q2M3M2 681 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 USP41Q3LFD5 358 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CBWD6Q4V339 395 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 SLC44A4Q53GD3 710 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CBWD3Q5JTY5 395 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CBWD5Q5RIA9 395 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 TLDC1Q6P9B6 456 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 PPP1R21Q6ZMI0 780 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 ETV3LQ6ZN32 361 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CIR1Q86X95 450 aaPredicted RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 TPH2Q8IWU9 490 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 C4orf19Q8IY42 314 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 LRRC34Q8IZ02 419 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 SYCP3Q8IZU3 236 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 MAB21L3Q8N8X9 362 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 XXYLT1Q8NBI6 393 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CKAP2Q8WWK9 683 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 PSPC1Q8WXF1 523 aaKnown RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 KIFAP3Q92845 792 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 PPP1R14AQ96A00 147 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CLDN23Q96B33 292 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 SNF8Q96H20 258 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 WWC2-AS2Q96NR7 200 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 FAM193BQ96PV7 902 aaPredicted RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 JPH2Q9BR39 696 aaPredicted RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CCDC77Q9BR77 488 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 C17orf75Q9HAS0 396 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 LTB4R2Q9NPC1 389 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 UBE2TQ9NPD8 197 aaPredicted RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 UBN1Q9NPG3 1134 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 ZDHHC7Q9NXF8 308 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 DONSONQ9NYP3 566 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 SENP1Q9P0U3 644 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 DNMT3BQ9UBC3 853 aaKnown RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 KCNG1Q9UIX4 513 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 NOCTQ9UK39 431 aaKnown RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 RALYQ9UKM9 306 aaKnown RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 ADAM28Q9UKQ2 775 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 CDH7Q9ULB5 785 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 RPL26L1Q9UNX3 145 aaKnown RBP5.06□□□□□ -1.6
CKS1B-201ENST00000308987 EXOC7Q9UPT5 735 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 GIT1Q9Y2X7 761 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 ARL2BPQ9Y2Y0 163 aa5.06□□□□□ -1.6
CKS1B-201ENST00000308987 SNX24Q9Y343 169 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms