RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 MTHFD1P11586 935 aaKnown RBP14.74□□□□□ -0.05
PTPN9-201ENST00000306726 ENTPD1P49961 510 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 TNFAIP2Q03169 654 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 VPS26BQ4G0F5 336 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 OR10Q1Q8NGQ4 319 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 PPTC7Q8NI37 304 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 GPR152Q8TDT2 470 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 CCDC138Q96M89 665 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 ZMAT2Q96NC0 199 aaKnown RBP14.74□□□□□ -0.05
PTPN9-201ENST00000306726 KLHL5Q96PQ7 755 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 DHRS4Q9BTZ2 278 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 C1orf50Q9BV19 199 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 PDLIM7Q9NR12 457 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 PRMT7Q9NVM4 692 aaPredicted RBP14.74□□□□□ -0.05
PTPN9-201ENST00000306726 MTF2Q9Y483 593 aaPredicted RBP14.74□□□□□ -0.05
PTPN9-201ENST00000306726 KLHL33A6NCF5 533 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 GNGT2O14610 69 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 MSI1O43347 362 aaKnown RBP14.74□□□□□ -0.05
PTPN9-201ENST00000306726 TADA2AO75478 443 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 KCNH1O95259 989 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 CCDC166P0CW27 439 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 STMN1P16949 149 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 ALDH4A1P30038 563 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 CPT1AP50416 773 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 GRAMD4Q6IC98 578 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 PLPPR4Q7Z2D5 763 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 RMND5BQ96G75 393 aaPredicted RBP14.74□□□□□ -0.05
PTPN9-201ENST00000306726 GCOM2Q9BZD3 368 aaPredicted RBP14.74□□□□□ -0.05
PTPN9-201ENST00000306726 SMARCAD1Q9H4L7 1026 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 PLAC1Q9HBJ0 212 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 PCDH12Q9NPG4 1184 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 RRN3Q9NYV6 651 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 LRRC14BA6NHZ5 514 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 TRMUO75648 421 aaKnown RBP14.74□□□□□ -0.05
PTPN9-201ENST00000306726 MAP4P27816 1152 aaKnown RBP14.74□□□□□ -0.05
PTPN9-201ENST00000306726 LRPAP1P30533 357 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 ADSLP30566 484 aaPredicted RBP14.74□□□□□ -0.05
PTPN9-201ENST00000306726 ABCD1P33897 745 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 SLC5A3P53794 718 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 ECT2LQ008S8 904 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 PRKCZQ05513 592 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 MILR1Q7Z6M3 343 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 LILRA2Q8N149 483 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 BLOC1S5Q8TDH9 187 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 ZNF296Q8WUU4 475 aaPredicted RBP14.74□□□□□ -0.05
PTPN9-201ENST00000306726 SLC29A1Q99808 456 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 SENP6Q9GZR1 1112 aaPredicted RBP14.74□□□□□ -0.05
PTPN9-201ENST00000306726 GPAMQ9HCL2 828 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 EXD2Q9NVH0 621 aa14.74□□□□□ -0.05
PTPN9-201ENST00000306726 SLC18A1P54219 525 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 ACBD5Q5T8D3 534 aaPredicted RBP14.73□□□□□ -0.05
PTPN9-201ENST00000306726 ARCQ7LC44 396 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.73□□□□□ -0.05
PTPN9-201ENST00000306726 PSD4Q8NDX1 1056 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 KLHL32Q96NJ5 620 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 TKTL2Q9H0I9 626 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 WDCPQ9H6R7 721 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 STAP1Q9ULZ2 295 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 FAM50BQ9Y247 325 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 TIMM22Q9Y584 194 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 FAM95CA0A1B0GW59 222 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 PLOD2O00469 737 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 SIX3O95343 332 aaPredicted RBP14.73□□□□□ -0.05
PTPN9-201ENST00000306726 PRKCHP24723 683 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 ZNF534Q76KX8 674 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 CBR4Q8N4T8 237 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 CANT1Q8WVQ1 401 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 LPPQ93052 612 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 MTG1Q9BT17 334 aaPredicted RBP14.73□□□□□ -0.05
PTPN9-201ENST00000306726 LHX5Q9H2C1 402 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 SSU72Q9NP77 194 aaKnown RBP14.73□□□□□ -0.05
PTPN9-201ENST00000306726 BCAP29Q9UHQ4 241 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 TCRBV5S1A1TA0A578 114 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 GNAO1P09471 354 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 AOC1P19801 751 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 SNX16P57768 344 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 NKX3-2P78367 333 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 NRG1Q02297 640 aaPredicted RBP14.73□□□□□ -0.05
PTPN9-201ENST00000306726 ITGA7Q13683 1181 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 OLFML1Q6UWY5 402 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 METTL25Q8N6Q8 603 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 GIPC3Q8TF64 312 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 ELMO1Q92556 727 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 GPR20Q99678 358 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 SEZ6LQ9BYH1 1024 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 TMEM134Q9H6X4 195 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 ERAP1Q9NZ08 941 aa14.73□□□□□ -0.05
PTPN9-201ENST00000306726 DUSP11O75319 330 aaKnown RBP14.72□□□□□ -0.05
PTPN9-201ENST00000306726 TMCC1O94876 653 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 ACTRT2Q8TDY3 377 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 DNAJB3Q8WWF6 145 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 JADE3Q92613 823 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 EFHD1Q9BUP0 239 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 KATNAL1Q9BW62 490 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 PDZD7Q9H5P4 517 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 PIGVQ9NUD9 493 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 CHCHD3Q9NX63 227 aaKnown RBP14.72□□□□□ -0.05
PTPN9-201ENST00000306726 COPG1Q9Y678 874 aaKnown RBP14.72□□□□□ -0.05
PTPN9-201ENST00000306726 IGKV6D-21A0A0A0MT36 114 aa14.72□□□□□ -0.05
PTPN9-201ENST00000306726 H3BMM5 538 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms