RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 PAFAH2Q99487 392 aa17.74■□□□□ 0.43
KRT28-201ENST00000306658 S1PR5Q9H228 398 aa17.74■□□□□ 0.43
KRT28-201ENST00000306658 PSMC3IPQ9P2W1 217 aaPredicted RBP17.74■□□□□ 0.43
KRT28-201ENST00000306658 TBK1Q9UHD2 729 aa17.74■□□□□ 0.43
KRT28-201ENST00000306658 CDH22Q9UJ99 828 aa17.74■□□□□ 0.43
KRT28-201ENST00000306658 INTS6Q9UL03 887 aaKnown RBP17.74■□□□□ 0.43
KRT28-201ENST00000306658 SOX13Q9UN79 622 aa17.74■□□□□ 0.43
KRT28-201ENST00000306658 ARIH1Q9Y4X5 557 aaPredicted RBP17.74■□□□□ 0.43
KRT28-201ENST00000306658 NFATC1O95644 943 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 MT-CO1P00395 513 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 ADH5P11766 374 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 PABPC1P11940 636 aaKnown RBP17.73■□□□□ 0.43
KRT28-201ENST00000306658 HLA-DPA1P20036 260 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 GCAP28676 217 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 RGRP47804 291 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 MAGOHP61326 146 aaKnown RBP17.73■□□□□ 0.43
KRT28-201ENST00000306658 SULT2A1Q06520 285 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 NR1H3Q13133 447 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 IHHQ14623 411 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 TNFAIP8L3Q5GJ75 292 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 ZNF449Q6P9G9 518 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 ADGRD1Q6QNK2 874 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 EP400NLQ6ZTU2 488 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 LRRC6Q86X45 466 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 CTAGE3PQ8IX95 158 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 SLC25A41Q8N5S1 370 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 CDKL2Q92772 493 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 ATP2A3Q93084 1043 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 MRRFQ96E11 262 aaKnown RBP17.73■□□□□ 0.43
KRT28-201ENST00000306658 EXOC2Q96KP1 924 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 TRIM56Q9BRZ2 755 aaKnown RBP17.73■□□□□ 0.43
KRT28-201ENST00000306658 KIFC1Q9BW19 673 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 CLDND1Q9NY35 253 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 CTNNAL1Q9UBT7 734 aa17.73■□□□□ 0.43
KRT28-201ENST00000306658 FCF1Q9Y324 198 aaKnown RBP17.73■□□□□ 0.43
KRT28-201ENST00000306658 RRP9O43818 475 aaKnown RBP17.72■□□□□ 0.43
KRT28-201ENST00000306658 GJB3O75712 270 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 CYP17A1P05093 508 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 INHBAP08476 426 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 ADRA1DP25100 572 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 CHRNA4P43681 627 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 FRG1Q14331 258 aaKnown RBP17.72■□□□□ 0.43
KRT28-201ENST00000306658 POU6F1Q14863 301 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 CTC1Q2NKJ3 1217 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 ANKRD20A4Q4UJ75 823 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 TAOK1Q7L7X3 1001 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.72■□□□□ 0.43
KRT28-201ENST00000306658 ZNF669Q96BR6 464 aaPredicted RBP17.72■□□□□ 0.43
KRT28-201ENST00000306658 DHRS4Q9BTZ2 278 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 PPANQ9NQ55 473 aaKnown RBP17.72■□□□□ 0.43
KRT28-201ENST00000306658 CHRAC1Q9NRG0 131 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 EURLQ9NYK6 297 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 LHX3Q9UBR4 397 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 SLC25A13Q9UJS0 675 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 MTCH2Q9Y6C9 303 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 FAM169AQ9Y6X4 670 aa17.72■□□□□ 0.43
KRT28-201ENST00000306658 FAM159BA6NKW6 160 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 HOXC11O43248 304 aaPredicted RBP17.71■□□□□ 0.43
KRT28-201ENST00000306658 FGF1P05230 155 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 NR1D1P20393 614 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 CA4P22748 312 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 MTHFRP42898 656 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 EFTUD2Q15029 972 aaKnown RBP eCLIP17.71■□□□□ 0.43
KRT28-201ENST00000306658 PDGFRLQ15198 375 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 TMED2Q15363 201 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 FUT11Q495W5 492 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 SIRPB2Q5JXA9 342 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 TRIM68Q6AZZ1 485 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 ASTLQ6HA08 431 aaPredicted RBP17.71■□□□□ 0.43
KRT28-201ENST00000306658 PKN3Q6P5Z2 889 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 TRMT10BQ6PF06 316 aaKnown RBP17.71■□□□□ 0.43
KRT28-201ENST00000306658 SLC26A11Q86WA9 606 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 AHI1Q8N157 1196 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 ARFGAP2Q8N6H7 521 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 PPM1NQ8N819 430 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 NAT16Q8N8M0 369 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 SLC44A1Q8WWI5 657 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 MRM3Q9HC36 420 aaKnown RBP17.71■□□□□ 0.43
KRT28-201ENST00000306658 FBXO10Q9UK96 956 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 HS3ST2Q9Y278 367 aa17.71■□□□□ 0.43
KRT28-201ENST00000306658 HEATR9A2RTY3 570 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 K7ERQ8 282 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 TBX10O75333 385 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 NDST3O95803 873 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 C1QAP02745 245 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 POU3F3P20264 500 aaPredicted RBP17.71■□□□□ 0.42
KRT28-201ENST00000306658 FCARP24071 287 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 MAPK8P45983 427 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 CSNK1DP48730 415 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 AP1S1P61966 158 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 DLX2Q07687 328 aaPredicted RBP17.71■□□□□ 0.42
KRT28-201ENST00000306658 NAB1Q13506 487 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 LAMB3Q13751 1172 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 TANGO2Q6ICL3 276 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 NCEH1Q6PIU2 408 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 CES3Q6UWW8 571 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 KIAA0907Q7Z7F0 614 aaPredicted RBP17.71■□□□□ 0.42
KRT28-201ENST00000306658 SRLQ86TD4 932 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 RNF135Q8IUD6 432 aa17.71■□□□□ 0.42
KRT28-201ENST00000306658 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms