RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 GGA2Q9UJY4 613 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 MAPRE3Q9UPY8 281 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 C15orf41Q9Y2V0 281 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 RAP2CQ9Y3L5 183 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 COL14A1Q05707 1796 aaKnown RBP16.08■□□□□ 0.16
USP42-201ENST00000306177 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.08■□□□□ 0.16
USP42-201ENST00000306177 ANKDD1BA6NHY2 528 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 CYP7B1O75881 506 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 FGF1P05230 155 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 ARL2P36404 184 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 GABRB2P47870 512 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 MAXP61244 160 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 CYP20A1Q6UW02 462 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 ZDHHC13Q8IUH4 622 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 CCDC103Q8IW40 242 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 NMD3Q96D46 503 aaKnown RBP16.08■□□□□ 0.16
USP42-201ENST00000306177 CPXM1Q96SM3 734 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 A0A088AWK7 358 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 QSOX1O00391 747 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 ZNF10P21506 573 aaPredicted RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 LPOP22079 712 aaPredicted RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 SMAD3P84022 425 aaKnown RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 PFKPQ01813 784 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 BHLHE22Q8NFJ8 381 aaPredicted RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 RCOR3Q9P2K3 495 aaPredicted RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 FBXO5Q9UKT4 447 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 AGO1Q9UL18 857 aaKnown RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 SCAMP3O14828 347 aaKnown RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 MAGEC1O60732 1142 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 SH3BGRLO75368 114 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 NOL4O94818 638 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 LCA5LO95447 670 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 MAPK9P45984 424 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 NPY5RQ15761 445 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 INSCQ1MX18 579 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 FIBCD1Q8N539 461 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 DHRSXQ8N5I4 330 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 SNX15Q9NRS6 342 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 ANAPC2Q9UJX6 822 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 MYRFQ9Y2G1 1151 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 MAFBQ9Y5Q3 323 aaPredicted RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 AVILO75366 819 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 ZNF280AP59817 542 aaPredicted RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 LIPMQ5VYY2 423 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 TBCDQ9BTW9 1192 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 COPG2Q9UBF2 871 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 COPG1Q9Y678 874 aaKnown RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 C1orf232A0A0U1RR37 186 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 SNRPB2P08579 225 aaKnown RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 PPM1AP35813 382 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 MRPS22P82650 360 aaKnown RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 SMARCB1Q12824 385 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 USP39Q53GS9 565 aaKnown RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 ALFQ53S48 1182 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 PACS1Q6VY07 963 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 LPCAT2Q7L5N7 544 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 TMEM139Q8IV31 216 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 DPP10Q8N608 796 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 USP7Q93009 1102 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 MTERF3Q96E29 417 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 ZFRQ96KR1 1074 aaKnown RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 SMAD5Q99717 465 aaKnown RBP16.07■□□□□ 0.16
USP42-201ENST00000306177 ATAD3AQ9NVI7 634 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 GTF2A1LQ9UNN4 478 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 ENTPD4Q9Y227 616 aa16.07■□□□□ 0.16
USP42-201ENST00000306177 HDAC3O15379 428 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 PAGE1O75459 146 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 COX4I1P13073 169 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 ATP6V0D1P61421 351 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 SKP1P63208 163 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 NET1Q7Z628 596 aaPredicted RBP16.06■□□□□ 0.16
USP42-201ENST00000306177 ADAMTSL2Q86TH1 951 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 PROX1Q92786 737 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 B3GNT5Q9BYG0 378 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 PHACTR1Q9C0D0 580 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 TPRKBQ9Y3C4 175 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 MRPS23Q9Y3D9 190 aaKnown RBP16.06■□□□□ 0.16
USP42-201ENST00000306177 PAPSS1O43252 624 aaPredicted RBP16.06■□□□□ 0.16
USP42-201ENST00000306177 PEX11AO75192 247 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 CNPP09543 421 aaKnown RBP16.06■□□□□ 0.16
USP42-201ENST00000306177 FGD3Q5JSP0 725 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 KHDRBS2Q5VWX1 349 aaKnown RBP16.06■□□□□ 0.16
USP42-201ENST00000306177 TXNDC11Q6PKC3 985 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 DET1Q7L5Y6 550 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 SPPL2BQ8TCT7 592 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 FNIP1Q8TF40 1166 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 PPP3R2Q96LZ3 170 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 ZNF184Q99676 751 aaPredicted RBP16.06■□□□□ 0.16
USP42-201ENST00000306177 CEP44Q9C0F1 390 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 A0A1B0GW55 424 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 MOXD2PA6NHM9 499 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 SGTAO43765 313 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 RECQL5O94762 991 aaPredicted RBP16.06■□□□□ 0.16
USP42-201ENST00000306177 DUX4L2P0CJ85 424 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 DUX4L3P0CJ86 424 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 DUX4L4P0CJ87 422 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 DUX4L5P0CJ88 424 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 DUX4L6P0CJ89 424 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 DUX4L7P0CJ90 424 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 CXCR2P25025 360 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms