RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 PCSK7Q16549 785 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 TAF1BQ53T94 588 aaPredicted RBP19.63■□□□□ 0.73
HOXC4-201ENST00000303406 PACS2Q86VP3 889 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 HERC6Q8IVU3 1022 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 SREK1Q8WXA9 508 aaKnown RBP19.63■□□□□ 0.73
HOXC4-201ENST00000303406 KLHL29Q96CT2 875 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 MGME1Q9BQP7 344 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 C11orf49Q9H6J7 331 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 SEPT3Q9UH03 358 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 TLK1Q9UKI8 766 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 A0A1B0GVM2 712 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 TCAF2A6NFQ2 919 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 MROH6A6NGR9 719 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 TRAFD1O14545 582 aaPredicted RBP19.62■□□□□ 0.73
HOXC4-201ENST00000303406 SLC7A4O43246 635 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 CPA3P15088 417 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 GABRB3P28472 473 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 CRABP2P29373 138 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 CORO1AP31146 461 aaKnown RBP19.62■□□□□ 0.73
HOXC4-201ENST00000303406 CD151P48509 253 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 EPHB3P54753 998 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 CNGA3Q16281 694 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 ADGRF1Q5T601 910 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 CES4AQ5XG92 561 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 FBXW10Q5XX13 1052 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 ITIH5Q86UX2 942 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 PRICKLE1Q96MT3 831 aaPredicted RBP19.62■□□□□ 0.73
HOXC4-201ENST00000303406 TSNARE1Q96NA8 513 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 TMEM237Q96Q45 408 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 WWP1Q9H0M0 922 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 LRMDAQ9H2I8 198 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 SSX2IPQ9Y2D8 614 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 TBC1D30Q9Y2I9 924 aa19.62■□□□□ 0.73
HOXC4-201ENST00000303406 KLKB1P03952 638 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 MYL2P10916 166 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 GJA8P48165 433 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 OXCT1P55809 520 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 DEFB103AP81534 67 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 ACVR1Q04771 509 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 SLC12A1Q13621 1099 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 SEPT6Q14141 434 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 USP10Q14694 798 aaKnown RBP19.61■□□□□ 0.73
HOXC4-201ENST00000303406 KRT72Q14CN4 511 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 SMAD1Q15797 465 aaKnown RBP19.61■□□□□ 0.73
HOXC4-201ENST00000303406 SIRPB2Q5JXA9 342 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 NEPROQ6NW34 567 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 RFWD3Q6PCD5 774 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 CLNKQ7Z7G1 428 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 DENND1CQ8IV53 801 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 SLC25A41Q8N5S1 370 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 ARMC5Q96C12 935 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 PSKH2Q96QS6 385 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 SEMA3CQ99985 751 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 C1QTNF1Q9BXJ1 281 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 ACE2Q9BYF1 805 aaPredicted RBP19.61■□□□□ 0.73
HOXC4-201ENST00000303406 ATXN3LQ9H3M9 355 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 HEY2Q9UBP5 337 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 SLC2A6Q9UGQ3 507 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 LNPEPQ9UIQ6 1025 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 FBXO5Q9UKT4 447 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 SLC39A10Q9ULF5 831 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 ASB3Q9Y575 518 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 INSL5Q9Y5Q6 135 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 PLXNA4Q9HCM2 1894 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.61■□□□□ 0.73
HOXC4-201ENST00000303406 CCDC195A0A1B0GUA6 201 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 TMEM114B3SHH9 223 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 PRRG1O14668 218 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 LILRB3O75022 631 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 OLFM2O95897 454 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 RALBP11234 206 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 SLC1A2P43004 574 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 SLC1A6P48664 564 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 POU4F1Q01851 419 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 TWF1Q12792 350 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 ZNF177Q13360 481 aaPredicted RBP19.61■□□□□ 0.73
HOXC4-201ENST00000303406 IHHQ14623 411 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 CTC1Q2NKJ3 1217 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 PABPC1LQ4VXU2 614 aaKnown RBP19.61■□□□□ 0.73
HOXC4-201ENST00000303406 CYB5D1Q6P9G0 228 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 DNAJB7Q7Z6W7 309 aaPredicted RBP19.61■□□□□ 0.73
HOXC4-201ENST00000303406 MTDHQ86UE4 582 aaKnown RBP19.61■□□□□ 0.73
HOXC4-201ENST00000303406 C10orf107Q8IVU9 208 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 ARID3BQ8IVW6 561 aaPredicted RBP19.61■□□□□ 0.73
HOXC4-201ENST00000303406 CFAP52Q8N1V2 620 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 PLD6Q8N2A8 252 aaKnown RBP19.61■□□□□ 0.73
HOXC4-201ENST00000303406 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.61■□□□□ 0.73
HOXC4-201ENST00000303406 ATXN7L3BQ96GX2 97 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 MFSD1Q9H3U5 465 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 NMRAL1Q9HBL8 299 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 MRPL17Q9NRX2 175 aaKnown RBP19.61■□□□□ 0.73
HOXC4-201ENST00000303406 KLC4Q9NSK0 619 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 WBP1LQ9NX94 342 aa19.61■□□□□ 0.73
HOXC4-201ENST00000303406 UBA2Q9UBT2 640 aaPredicted RBP19.61■□□□□ 0.73
HOXC4-201ENST00000303406 AGO1Q9UL18 857 aaKnown RBP19.61■□□□□ 0.73
HOXC4-201ENST00000303406 ANAPC1Q9H1A4 1944 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 A0A087X1B8 175 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 FAM95CA0A1B0GW59 222 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 GOLGA8TH3BQL2 631 aa19.6■□□□□ 0.73
HOXC4-201ENST00000303406 MGRN1O60291 552 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms