RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ADAM28Q9UKQ2 775 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 DSEQ9UL01 958 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 FADS3Q9Y5Q0 445 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 A0A087WZ62 844 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 ZCWPW2A0A1B0GU75 182 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 CFAP99D6REC4 459 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 M0QYT0 321 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 TOR1BO14657 336 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 CES1P23141 567 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 CLCN2P51788 898 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 STX1BP61266 288 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 MXD4Q14582 209 aaPredicted RBP14.81□□□□□ -0.04
COL6A2-201ENST00000300527 HABP4Q5JVS0 413 aaKnown RBP14.81□□□□□ -0.04
COL6A2-201ENST00000300527 PIGZQ86VD9 579 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 IFNLR1Q8IU57 520 aaPredicted RBP14.81□□□□□ -0.04
COL6A2-201ENST00000300527 KDM1BQ8NB78 822 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 TXNDC5Q8NBS9 432 aaKnown RBP14.81□□□□□ -0.04
COL6A2-201ENST00000300527 TBC1D15Q8TC07 691 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 HM13Q8TCT9 377 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 SEPT1Q8WYJ6 367 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 FDXACB1Q9BRP7 624 aaPredicted RBP14.81□□□□□ -0.04
COL6A2-201ENST00000300527 NIFKQ9BYG3 293 aaKnown RBP14.81□□□□□ -0.04
COL6A2-201ENST00000300527 GID8Q9NWU2 228 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.81□□□□□ -0.04
COL6A2-201ENST00000300527 TRPC5OSA6NMA1 111 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 KDM1AO60341 852 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 VTNP04004 478 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 SBK3P0C264 359 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 IL10P22301 178 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 C1QTNF8P60827 252 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 RBP5P82980 135 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 MERTKQ12866 999 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 GRM1Q13255 1194 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 NAB1Q13506 487 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 NHSL2Q5HYW2 709 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 PSTKQ8IV42 348 aaKnown RBP14.81□□□□□ -0.04
COL6A2-201ENST00000300527 CEP97Q8IW35 865 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 NPLQ9BXD5 320 aaPredicted RBP14.81□□□□□ -0.04
COL6A2-201ENST00000300527 TNFRSF12AQ9NP84 129 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 SACM1LQ9NTJ5 587 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 NCKIPSDQ9NZQ3 722 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 SUCOQ9UBS9 1254 aaKnown RBP14.81□□□□□ -0.04
COL6A2-201ENST00000300527 ZNF214Q9UL59 606 aaPredicted RBP14.81□□□□□ -0.04
COL6A2-201ENST00000300527 PTGDR2Q9Y5Y4 395 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 ST14Q9Y5Y6 855 aa14.81□□□□□ -0.04
COL6A2-201ENST00000300527 ZBBXA8MT70 800 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 SPTLC1O15269 473 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 H2AFYO75367 372 aaKnown RBP14.8□□□□□ -0.04
COL6A2-201ENST00000300527 FARP2O94887 1054 aaPredicted RBP14.8□□□□□ -0.04
COL6A2-201ENST00000300527 IL18RAPO95256 599 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 BMP10O95393 424 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 CDH13P55290 713 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 GSTM4Q03013 218 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 RPS6KA2Q15349 733 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 FAM83EQ2M2I3 478 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 SLC10A6Q3KNW5 377 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 SAMD4BQ5PRF9 694 aaKnown RBP14.8□□□□□ -0.04
COL6A2-201ENST00000300527 IPMKQ8NFU5 416 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 GABPB2Q8TAK5 448 aaPredicted RBP14.8□□□□□ -0.04
COL6A2-201ENST00000300527 PPP1R13LQ8WUF5 828 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 TFAP2CQ92754 450 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 COPS5Q92905 334 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 ANKRD60Q9BZ19 345 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 ING2Q9H160 280 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 MRPL46Q9H2W6 279 aaKnown RBP14.8□□□□□ -0.04
COL6A2-201ENST00000300527 CYP3A43Q9HB55 503 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 PPP1R1BQ9UD71 204 aaPredicted RBP14.8□□□□□ -0.04
COL6A2-201ENST00000300527 DHRS12A0PJE2 317 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 NRP2O60462 931 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 MAN1A2O60476 641 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 BCL10O95999 233 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 HOXD12P35452 270 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 BAG6P46379 1132 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 SLC12A1Q13621 1099 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 RGS21Q2M5E4 152 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 ZNF829Q3KNS6 432 aaPredicted RBP14.8□□□□□ -0.04
COL6A2-201ENST00000300527 VPS26BQ4G0F5 336 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 PDCD4Q53EL6 469 aaKnown RBP14.8□□□□□ -0.04
COL6A2-201ENST00000300527 OR2T34Q8NGX1 318 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 OR2T3Q8NH03 318 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 DGCR6LQ9BY27 220 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 FANCEQ9HB96 536 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 FAM95CA0A1B0GW59 222 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 KANSL1LA0AUZ9 987 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 AHSGP02765 367 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 SLC35E2BP0CK96 405 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 STMN1P16949 149 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 PFKPQ01813 784 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 NSUN2Q08J23 767 aaKnown RBP eCLIP14.8□□□□□ -0.04
COL6A2-201ENST00000300527 MAPK11Q15759 364 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 CYP51A1Q16850 503 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 OTOP3Q7RTS5 596 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 CAMK1DQ8IU85 385 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 CPSF7Q8N684 471 aaKnown RBP14.8□□□□□ -0.04
COL6A2-201ENST00000300527 SPATA22Q8NHS9 363 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 C2orf40Q9H1Z8 148 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 PRDM16Q9HAZ2 1276 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 WDR37Q9Y2I8 494 aa14.8□□□□□ -0.04
COL6A2-201ENST00000300527 SUPT7LO94864 414 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 PTPN3P26045 913 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms