RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 MIOSQ9NXC5 875 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 AHSPQ9NZD4 102 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 VTI1BQ9UEU0 232 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 RPL26L1Q9UNX3 145 aaKnown RBP8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 COL4A1P02462 1669 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 LOXHD1Q8IVV2 1947 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 C1orf232A0A0U1RR37 186 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 NPC1O15118 1278 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 VPS4BO75351 444 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 SLC2A4P14672 509 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 GPR1P46091 355 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 NRIP1P48552 1158 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 CYP4F8P98187 520 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 GBE1Q04446 702 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 SCAPQ12770 1279 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 MAD2L1Q13257 205 aaPredicted RBP8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 LRRC14Q15048 493 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 PCDH19Q8TAB3 1148 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 EPS8L3Q8TE67 593 aaKnown RBP8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 UBE2E3Q969T4 207 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 AZIN2Q96A70 460 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 PRMT1Q99873 361 aaKnown RBP8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 LPIN3Q9BQK8 851 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 FAM126AQ9BYI3 521 aaPredicted RBP8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 PRR23AA6NEV1 266 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 CFAP73A6NFT4 308 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 LRRC72A6NJI9 287 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 CACNB4O00305 520 aaPredicted RBP8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 SPTLC1O15269 473 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 ZBTB14O43829 449 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 RPP40O75818 363 aaKnown RBP8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 KRT6AP02538 564 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 KRT6BP04259 564 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 ELFN1P0C7U0 828 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 PYGBP11216 843 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 ADH5P11766 374 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 PCSK2P16519 638 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 KRT6CP48668 564 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 ANXA11P50995 505 aaKnown RBP8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 HK2P52789 917 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 LRRC32Q14392 662 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 STXBP5Q5T5C0 1151 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 DCAF4L2Q8NA75 395 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 GRIN3AQ8TCU5 1115 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 KBTBD7Q8WVZ9 684 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 COPS8Q99627 209 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 RASSF4Q9H2L5 321 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 PHPT1Q9NRX4 125 aaPredicted RBP8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 TMEM248Q9NWD8 314 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 SAE1Q9UBE0 346 aaPredicted RBP8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 RAB23Q9ULC3 237 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 PHTF1Q9UMS5 762 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 EIF3LQ9Y262 564 aaKnown RBP8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 RAI2Q9Y5P3 530 aa8.39□□□□□ -1.07
SNRPD1-201ENST00000300413 DLEC1Q9Y238 1755 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 FAM95CA0A1B0GW59 222 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 NOL3O60936 208 aaKnown RBP8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 PRKAA1Q13131 559 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 CHI3L2Q15782 390 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 DNAL1Q4LDG9 190 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 ANKRD20A4Q4UJ75 823 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 CACHD1Q5VU97 1274 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 HIBCHQ6NVY1 386 aaPredicted RBP8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 ALKAL1Q6UXT8 129 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 TMC5Q6UXY8 1006 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 PHACTR4Q8IZ21 702 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 CMTM5Q96DZ9 223 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 RSRC1Q96IZ7 334 aaKnown RBP8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 KLHL5Q96PQ7 755 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 SUDS3Q9H7L9 328 aaPredicted RBP8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 PIGVQ9NUD9 493 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 A0A096LPK6 155 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 ANGPT2O15123 496 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 GYG2O15488 501 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 MGEA5O60502 916 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 COL6A2P12110 1019 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 SYPL2Q5VXT5 272 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 SLC9A4Q6AI14 798 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 AADACL2Q6P093 401 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 ADAMTSL2Q86TH1 951 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 CFAP52Q8N1V2 620 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 OR4L1Q8NH43 312 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 SLC35B2Q8TB61 432 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 STAG3L4Q8TBR4 150 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 NDRG1Q92597 394 aaKnown RBP8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 PGAP3Q96FM1 320 aaPredicted RBP8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 FAM111AQ96PZ2 611 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 NLNQ9BYT8 704 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 CERS4Q9HA82 394 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 ZFYVE1Q9HBF4 777 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 TMPRSS4Q9NRS4 437 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 DTLQ9NZJ0 730 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 TMEM59LQ9UK28 342 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 PCDHB9Q9Y5E1 797 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 MRPL42Q9Y6G3 142 aaKnown RBP8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 SUPT7LO94864 414 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 SERPINE1P05121 402 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 CASP2P42575 452 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 GATMP50440 423 aa8.38□□□□□ -1.07
SNRPD1-201ENST00000300413 FAAP100Q0VG06 881 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms