RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 RRN3Q9NYV6 651 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 SRRDQ9UH36 339 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 ZNF180Q9UJW8 692 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 A0A1W2PQ45 241 aaPredicted RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 A0A1W2PQY0 241 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 EME2A4GXA9 379 aaPredicted RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 ADAM12O43184 909 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 SORBS2O94875 1100 aaKnown RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 PRSS56P0CW18 603 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 MLNP12872 115 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 ARSAP15289 507 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 PEX19P40855 299 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 SLC11A1P49279 550 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 MLLT6P55198 1093 aaPredicted RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 ARL13AQ5H913 290 aaPredicted RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 PIK3R6Q5UE93 754 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 FUT10Q6P4F1 479 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 PKN3Q6P5Z2 889 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 TPGS1Q6ZTW0 290 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 FSTL5Q8N475 847 aaPredicted RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 ADA2Q9NZK5 511 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.4□□□□□ -0.9
PRDM9-201ENST00000296682 ZNF623O75123 536 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 GFAPP14136 432 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 GJA1P17302 382 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 GLDCP23378 1020 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 SLC1A2P43004 574 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 ART3Q13508 389 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 RPS6KA2Q15349 733 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 RABGAP1LQ5R372 815 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 SH2D4BQ5SQS7 431 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 SCIMPQ6UWF3 145 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 PHTF2Q8N3S3 785 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 LPCAT1Q8NF37 534 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 CRISPLD1Q9H336 500 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 TLE6Q9H808 572 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 CREBZFQ9NS37 354 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 ARL5AQ9Y689 179 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 KLF11O14901 512 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 MATN3O15232 486 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 GJB5O95377 273 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 WEE1P30291 646 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 ABL2P42684 1182 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 CD151P48509 253 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 SERPINH1P50454 418 aaKnown RBP9.4□□□□□ -0.9
PRDM9-201ENST00000296682 CSRP3P50461 194 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 LIMK2P53671 638 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 PCLAFQ15004 111 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 NAPRTQ6XQN6 538 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 MARK2Q7KZI7 788 aaKnown RBP9.4□□□□□ -0.9
PRDM9-201ENST00000296682 PIM3Q86V86 326 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 SCUBE1Q8IWY4 988 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 DDIASQ8IXT1 998 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 SHKBP1Q8TBC3 707 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 BEGAINQ9BUH8 593 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 ATP13A1Q9HD20 1204 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 KCNK4Q9NYG8 393 aa9.4□□□□□ -0.9
PRDM9-201ENST00000296682 ZCWPW2A0A1B0GU75 182 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 H0Y626 953 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 MAFKO60675 156 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 ALDH1A1P00352 501 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 CNTFP26441 200 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 OCRLQ01968 901 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 GRAMD1BQ3KR37 738 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 SLC9B1Q4ZJI4 515 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 ZRANB3Q5FWF4 1079 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 MS4A13Q5J8X5 152 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 ARTNQ5T4W7 220 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 FAM171BQ6P995 826 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 RPAINQ86UA6 219 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 CEP97Q8IW35 865 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 OR13C4Q8NGS5 318 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 SEPT8Q92599 483 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 DPF3Q92784 378 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 OR52B2Q96RD2 323 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 LRMDAQ9H2I8 198 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 POMKQ9H5K3 350 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 TCF7L2Q9NQB0 619 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 TAGLN3Q9UI15 199 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 EMCNQ9ULC0 261 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 MTF2Q9Y483 593 aaPredicted RBP9.4□□□□□ -0.91
PRDM9-201ENST00000296682 WASF2Q9Y6W5 498 aa9.4□□□□□ -0.91
PRDM9-201ENST00000296682 MBL2P11226 248 aaPredicted RBP9.39□□□□□ -0.91
PRDM9-201ENST00000296682 FGF3P11487 239 aaPredicted RBP9.39□□□□□ -0.91
PRDM9-201ENST00000296682 GM2AP17900 193 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 HDCP19113 662 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 FMO4P31512 558 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 COPAP53621 1224 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 TSNAXIP1Q2TAA8 658 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 KLC3Q6P597 504 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 RSPO2Q6UXX9 243 aaPredicted RBP9.39□□□□□ -0.91
PRDM9-201ENST00000296682 RTL3Q8N8U3 475 aaKnown RBP9.39□□□□□ -0.91
PRDM9-201ENST00000296682 VAT1Q99536 393 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 TRIM62Q9BVG3 475 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 PCDHB8Q9UN66 801 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 AK5Q9Y6K8 562 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 COL4A6Q14031 1691 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 ENPP3O14638 875 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 CTPS1P17812 591 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 CHRM3P20309 590 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms