RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 MRPL45Q9BRJ2 306 aaKnown RBP12.91□□□□□ -0.34
PTCD1-201ENST00000292478 ZW10O43264 779 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 GUCA1AP43080 201 aaPredicted RBP12.9□□□□□ -0.34
PTCD1-201ENST00000292478 PSME3P61289 254 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 CDK18Q07002 472 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 TTC23Q5W5X9 447 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 FBXL19Q6PCT2 694 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 CYP2R1Q6VVX0 501 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 C11orf74Q86VG3 221 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 ZNF614Q8N883 585 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 BSNDQ8WZ55 320 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 SUSD6Q92537 303 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 TBC1D10AQ9BXI6 508 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 DHX33Q9H6R0 707 aaKnown RBP12.9□□□□□ -0.34
PTCD1-201ENST00000292478 REEP1Q9H902 201 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 PAPOLBQ9NRJ5 636 aaKnown RBP12.9□□□□□ -0.34
PTCD1-201ENST00000292478 SNX15Q9NRS6 342 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 FZD1Q9UP38 647 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 SATB2Q9UPW6 733 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 MAFBQ9Y5Q3 323 aaPredicted RBP12.9□□□□□ -0.34
PTCD1-201ENST00000292478 IFT172Q9UG01 1749 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 OTCP00480 354 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 PTPN20Q4JDL3 420 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 ZNF621Q6ZSS3 439 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 DPP10Q8N608 796 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 ZDHHC6Q9H6R6 413 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 FBXO5Q9UKT4 447 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 NFAT5O94916 1531 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 SMNDC1O75940 238 aaKnown RBP eCLIP12.9□□□□□ -0.34
PTCD1-201ENST00000292478 KRT75O95678 551 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 XIAPP98170 497 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 TUSC3Q13454 348 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 PWP1Q13610 501 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 USP39Q53GS9 565 aaKnown RBP12.9□□□□□ -0.34
PTCD1-201ENST00000292478 CHMP1BQ7LBR1 199 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 KRT73Q86Y46 540 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 TRPC4APQ8TEL6 797 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 HPS4Q9NQG7 708 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 KLQ9UEF7 1012 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 NUDT5Q9UKK9 219 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 KNDC1Q76NI1 1749 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 PNMA8CA0A1B0GUJ8 204 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 KPNA3O00505 521 aaPredicted RBP12.9□□□□□ -0.34
PTCD1-201ENST00000292478 ASGR1P07306 291 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 ABCB1P08183 1280 aaPredicted RBP12.9□□□□□ -0.34
PTCD1-201ENST00000292478 CRADDP78560 199 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 LBX2Q6XYB7 198 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 JOSD2Q8TAC2 188 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 HEXDCQ8WVB3 486 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 USP7Q93009 1102 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 P2RY11Q96G91 374 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 LGMNQ99538 433 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 OSBPL6Q9BZF3 934 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 RHOJQ9H4E5 214 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 MAN1C1Q9NR34 630 aa12.9□□□□□ -0.34
PTCD1-201ENST00000292478 TDRKHQ9Y2W6 561 aaKnown RBP12.9□□□□□ -0.34
PTCD1-201ENST00000292478 ANKDD1BA6NHY2 528 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 EVX2Q03828 476 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 DGUOKQ16854 277 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 INO80DQ53TQ3 878 aaPredicted RBP12.89□□□□□ -0.35
PTCD1-201ENST00000292478 CEP78Q5JTW2 689 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 CYP20A1Q6UW02 462 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 VSTM1Q6UX27 236 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 PACS2Q86VP3 889 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 CLYBLQ8N0X4 340 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 SPPL2BQ8TCT7 592 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 SLC44A1Q8WWI5 657 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 C19orf60Q96EN9 201 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 CDH19Q9H159 772 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 ENTPD4Q9Y227 616 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 RNF225M0QZC1 329 aaPredicted RBP12.89□□□□□ -0.35
PTCD1-201ENST00000292478 SPTLC1O15269 473 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 MMP3P08254 477 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 HDCP19113 662 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 CRHR1P34998 444 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 RFX3P48380 749 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 POU5F1Q01860 360 aaKnown RBP12.89□□□□□ -0.35
PTCD1-201ENST00000292478 GRM3Q14832 879 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 ZDHHC20Q5W0Z9 365 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 ZNF549Q6P9A3 640 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 ZNF605Q86T29 641 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 C8orf59Q8N0T1 100 aaPredicted RBP12.89□□□□□ -0.35
PTCD1-201ENST00000292478 ZNF655Q8N720 491 aaPredicted RBP12.89□□□□□ -0.35
PTCD1-201ENST00000292478 KCTD4Q8WVF5 259 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 TPD52L3Q96J77 140 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 SSU72Q9NP77 194 aaKnown RBP12.89□□□□□ -0.35
PTCD1-201ENST00000292478 MED26O95402 600 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 NTSP30990 170 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 NUMBP49757 651 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 ITGA1P56199 1179 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 MRPS22P82650 360 aaKnown RBP12.89□□□□□ -0.35
PTCD1-201ENST00000292478 GSTA3Q16772 222 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 GPRIN3Q6ZVF9 776 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 ELMO1Q92556 727 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 ASAH2Q9NR71 780 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 IGLV3-22A0A075B6J6 115 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 MDM4O15151 490 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 PMM2O15305 246 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 PPM1AP35813 382 aa12.89□□□□□ -0.35
PTCD1-201ENST00000292478 TTC27Q6P3X3 843 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms