RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 PCDH15Q96QU1 1955 aa25.47■■□□□ 1.67
PDF-201ENST00000288022 A0A0A6YYK5 440 aaPredicted RBP25.47■■□□□ 1.67
PDF-201ENST00000288022 A0A1B0GVT2 93 aa25.47■■□□□ 1.67
PDF-201ENST00000288022 DCDC2BA2VCK2 349 aa25.47■■□□□ 1.67
PDF-201ENST00000288022 LATO43561 262 aa25.47■■□□□ 1.67
PDF-201ENST00000288022 RACK1P63244 317 aaKnown RBP25.47■■□□□ 1.67
PDF-201ENST00000288022 LRRC38Q5VT99 294 aa25.47■■□□□ 1.67
PDF-201ENST00000288022 LAYNQ6UX15 382 aa25.47■■□□□ 1.67
PDF-201ENST00000288022 DGLUCYQ7Z3D6 616 aa25.47■■□□□ 1.67
PDF-201ENST00000288022 FAF2Q96CS3 445 aa25.47■■□□□ 1.67
PDF-201ENST00000288022 ZDHHC5Q9C0B5 715 aa25.47■■□□□ 1.67
PDF-201ENST00000288022 SEPT3Q9UH03 358 aa25.47■■□□□ 1.67
PDF-201ENST00000288022 A0A1W2PQU0 124 aa25.46■■□□□ 1.67
PDF-201ENST00000288022 MAFKO60675 156 aa25.46■■□□□ 1.67
PDF-201ENST00000288022 PIGNO95427 931 aa25.46■■□□□ 1.67
PDF-201ENST00000288022 GRIA4P48058 902 aa25.46■■□□□ 1.67
PDF-201ENST00000288022 SLC10A7Q0GE19 358 aa25.46■■□□□ 1.67
PDF-201ENST00000288022 ZNF235Q14590 738 aa25.46■■□□□ 1.67
PDF-201ENST00000288022 GRM3Q14832 879 aa25.46■■□□□ 1.67
PDF-201ENST00000288022 PAFAH1B3Q15102 231 aaKnown RBP25.46■■□□□ 1.67
PDF-201ENST00000288022 SETMARQ53H47 684 aaPredicted RBP25.46■■□□□ 1.67
PDF-201ENST00000288022 NEK5Q6P3R8 708 aa25.46■■□□□ 1.67
PDF-201ENST00000288022 SRLQ86TD4 932 aa25.46■■□□□ 1.67
PDF-201ENST00000288022 ACRBPQ8NEB7 543 aa25.46■■□□□ 1.67
PDF-201ENST00000288022 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.46■■□□□ 1.67
PDF-201ENST00000288022 KLK6Q92876 244 aa25.46■■□□□ 1.67
PDF-201ENST00000288022 CPEB1Q9BZB8 566 aaKnown RBP25.46■■□□□ 1.67
PDF-201ENST00000288022 GOLPH3Q9H4A6 298 aa25.46■■□□□ 1.67
PDF-201ENST00000288022 DDX56Q9NY93 547 aaKnown RBP25.46■■□□□ 1.67
PDF-201ENST00000288022 ALG6Q9Y672 507 aa25.46■■□□□ 1.67
PDF-201ENST00000288022 C10orf142B7Z368 130 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 NEMP1O14524 444 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 OPHN1O60890 802 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 MAP3K6O95382 1288 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 NUDT1P36639 197 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 RGRP47804 291 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 RENBPP51606 427 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 NAP1L1P55209 391 aaKnown RBP25.45■■□□□ 1.66
PDF-201ENST00000288022 CFAP58Q5T655 872 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 KIAA1328Q86T90 577 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 TTC7BQ86TV6 843 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 HORMAD1Q86X24 394 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 TMEM139Q8IV31 216 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 BBS5Q8N3I7 341 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 PQLC3Q8N755 202 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 PAF1Q8N7H5 531 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 RAB7BQ96AH8 199 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 VOPP1Q96AW1 172 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 RNF25Q96BH1 459 aaPredicted RBP25.45■■□□□ 1.66
PDF-201ENST00000288022 RNF157Q96PX1 679 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 MAK16Q9BXY0 300 aaKnown RBP25.45■■□□□ 1.66
PDF-201ENST00000288022 REXO2Q9Y3B8 237 aaKnown RBP25.45■■□□□ 1.66
PDF-201ENST00000288022 FADS3Q9Y5Q0 445 aa25.45■■□□□ 1.66
PDF-201ENST00000288022 DMXL1Q9Y485 3027 aa25.44■■□□□ 1.66
PDF-201ENST00000288022 RCCD1A6NED2 376 aa25.44■■□□□ 1.66
PDF-201ENST00000288022 KCNA4P22459 653 aa25.44■■□□□ 1.66
PDF-201ENST00000288022 XPAP23025 273 aaPredicted RBP25.44■■□□□ 1.66
PDF-201ENST00000288022 ABL2P42684 1182 aa25.44■■□□□ 1.66
PDF-201ENST00000288022 CSNK1DP48730 415 aa25.44■■□□□ 1.66
PDF-201ENST00000288022 C21orf59P57076 290 aa25.44■■□□□ 1.66
PDF-201ENST00000288022 SLC45A4Q5BKX6 768 aa25.44■■□□□ 1.66
PDF-201ENST00000288022 NAPEPLDQ6IQ20 393 aa25.44■■□□□ 1.66
PDF-201ENST00000288022 IL27RAQ6UWB1 636 aa25.44■■□□□ 1.66
PDF-201ENST00000288022 LRRC49Q8IUZ0 686 aa25.44■■□□□ 1.66
PDF-201ENST00000288022 SKA1Q96BD8 255 aa25.44■■□□□ 1.66
PDF-201ENST00000288022 PSKH2Q96QS6 385 aa25.44■■□□□ 1.66
PDF-201ENST00000288022 DMTF1Q9Y222 760 aa25.44■■□□□ 1.66
PDF-201ENST00000288022 ANKRD6Q9Y2G4 727 aa25.44■■□□□ 1.66
PDF-201ENST00000288022 SLC31A1O15431 190 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 AP1G1O43747 822 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 PRLRP16471 622 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 CD38P28907 300 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 GARSP41250 739 aaKnown RBP25.43■■□□□ 1.66
PDF-201ENST00000288022 SCNN1BP51168 640 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 VAV2P52735 878 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 BNC1Q01954 994 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 GALNT2Q10471 571 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 KIF19Q2TAC6 998 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 LRRC73Q5JTD7 316 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 MARC1Q5VT66 337 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 SEL1L3Q68CR1 1132 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 C11orf63Q6NUN7 778 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 DAAM2Q86T65 1068 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 FEM1CQ96JP0 617 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 ZNF830Q96NB3 372 aaPredicted RBP25.43■■□□□ 1.66
PDF-201ENST00000288022 TUBGCP5Q96RT8 1024 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 SUV39H2Q9H5I1 410 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 GAREM1Q9H706 876 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 ATP13A3Q9H7F0 1226 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 DKK3Q9UBP4 350 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 ZFR2Q9UPR6 939 aaKnown RBP25.43■■□□□ 1.66
PDF-201ENST00000288022 ITM2BQ9Y287 266 aa25.43■■□□□ 1.66
PDF-201ENST00000288022 CEP250Q9BV73 2442 aa25.42■■□□□ 1.66
PDF-201ENST00000288022 C3orf70A6NLC5 250 aaPredicted RBP25.42■■□□□ 1.66
PDF-201ENST00000288022 ZNF487B1APH4 448 aa25.42■■□□□ 1.66
PDF-201ENST00000288022 WNT9AO14904 365 aa25.42■■□□□ 1.66
PDF-201ENST00000288022 MUSKO15146 869 aa25.42■■□□□ 1.66
PDF-201ENST00000288022 PSTPIP1O43586 416 aa25.42■■□□□ 1.66
PDF-201ENST00000288022 TSPAN6O43657 245 aa25.42■■□□□ 1.66
PDF-201ENST00000288022 CER1O95813 267 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms