RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 CCDC166P0CW27 439 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 GM2AP17900 193 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 CASP2P42575 452 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 PKNOX1P55347 436 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 RAD51Q06609 339 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 CBLBQ13191 982 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 MGAT5BQ3V5L5 792 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 CTXN3Q4LDR2 81 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 SAMD4BQ5PRF9 694 aaKnown RBP10.15□□□□□ -0.79
HMGCR-201ENST00000287936 NAIF1Q69YI7 327 aaPredicted RBP10.15□□□□□ -0.79
HMGCR-201ENST00000287936 ZNF280DQ6N043 979 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 SH2D5Q6ZV89 423 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 FRA10AC1Q70Z53 315 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 DSELQ8IZU8 1212 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 PCSK9Q8NBP7 692 aaKnown RBP10.15□□□□□ -0.79
HMGCR-201ENST00000287936 SPATA22Q8NHS9 363 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 LENG1Q96BZ8 264 aaPredicted RBP10.15□□□□□ -0.79
HMGCR-201ENST00000287936 PHF21BQ96EK2 531 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 BTBD9Q96Q07 612 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 PPP1R10Q96QC0 940 aaKnown RBP10.15□□□□□ -0.79
HMGCR-201ENST00000287936 DDX50Q9BQ39 737 aaKnown RBP10.15□□□□□ -0.79
HMGCR-201ENST00000287936 SLC25A51Q9H1U9 297 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 KAT6AQ92794 2004 aa10.15□□□□□ -0.79
HMGCR-201ENST00000287936 SLC12A8A0AV02 714 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 DUSP11O75319 330 aaKnown RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 BEST1O76090 585 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 RTN3O95197 1032 aaPredicted RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 TYMPP19971 482 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 CD86P42081 329 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 RPL26P61254 145 aaKnown RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 PSME3P61289 254 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 MPP1Q00013 466 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 PDK3Q15120 406 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 TIGD5Q53EQ6 642 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 LAYNQ6UX15 382 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 MON1AQ86VX9 555 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 MIB1Q86YT6 1006 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 RTL3Q8N8U3 475 aaKnown RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 SPDYE1Q8NFV5 336 aaPredicted RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 CNBD2Q96M20 576 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 ZBTB18Q99592 522 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 SEPT5Q99719 369 aaPredicted RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 OMDQ99983 421 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 C11orf84Q9BUA3 381 aaPredicted RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 CINPQ9BW66 212 aaPredicted RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 RNF103-CHMP3A0A140T963 221 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 SYCE1LA8MT33 242 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 FAM72CH0Y354 149 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 AKAP10O43572 662 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 SERPINF2P08697 491 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 YWHAQP27348 245 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 RPL34P49207 117 aaKnown RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 SLC5A3P53794 718 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 POLD3Q15054 466 aaPredicted RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 RBBP7Q16576 425 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 UBXN11Q5T124 520 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 FAM72AQ5TYM5 149 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 OLFML2BQ68BL8 750 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 FAM72DQ6L9T8 149 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 FAM72BQ86X60 149 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 ZFRQ96KR1 1074 aaKnown RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 POLR1EQ9GZS1 481 aaKnown RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 RIC8BQ9NVN3 520 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 SFMBT1Q9UHJ3 866 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 E9PAM4 449 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 TNFAIP8O95379 198 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 HOXD8P13378 290 aaPredicted RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 PSMC3P17980 439 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 CD52P31358 61 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 RABGGTBP53611 331 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 ARMC3Q5W041 872 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 ESRP1Q6NXG1 681 aaKnown RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 NUP93Q8N1F7 819 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 ZNF276Q8N554 614 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 EFCAB3Q8N7B9 438 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 ADCY4Q8NFM4 1077 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 MLPHQ9BV36 600 aaPredicted RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 MRM3Q9HC36 420 aaKnown RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 USP3Q9Y6I4 520 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 GABRDO14764 452 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 CLPTM1O96005 669 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 FAM58BPP0C7Q3 252 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 RHOQP17081 205 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 GJA5P36382 358 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 KCNK10P57789 538 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 SATB1Q01826 763 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 SREBF2Q12772 1141 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 PLD6Q8N2A8 252 aaKnown RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 UCMAQ8WVF2 138 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 GCNAQ96QF7 691 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 SLC39A8Q9C0K1 460 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 COPS7BQ9H9Q2 264 aaPredicted RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 CLIC5Q9NZA1 410 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 NUDT5Q9UKK9 219 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 PPM1HQ9ULR3 514 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 RNF112Q9ULX5 631 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 PLA2G4CQ9UP65 541 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 AURKCQ9UQB9 309 aa10.14□□□□□ -0.79
HMGCR-201ENST00000287936 FNDC3AQ9Y2H6 1198 aaKnown RBP10.14□□□□□ -0.79
HMGCR-201ENST00000287936 TNS1Q9HBL0 1735 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms