RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 TMEM126BQ8IUX1 230 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 NUP93Q8N1F7 819 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 CRIPAKQ8N1N5 446 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 PHTF2Q8N3S3 785 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 NAT9Q9BTE0 207 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 SMOC2Q9H3U7 446 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 ARHGEF38Q9NXL2 777 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 MAGED2Q9UNF1 606 aaPredicted RBP18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 PCDHB5Q9Y5E4 795 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 PCDHB12Q9Y5F1 795 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 LOC100653049A0A140TA62 436 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 KRT34O76011 436 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 VNN2O95498 520 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 SMIM18P0DKX4 95 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 ARRB2P32121 409 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 VWA5B1Q5TIE3 1220 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 EPGNQ6UW88 154 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 RNF19BQ6ZMZ0 732 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 TMC7Q7Z402 723 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 C14orf80Q86SX3 495 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 PQLC1Q8N2U9 271 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 USP33Q8TEY7 942 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 FCRL2Q96LA5 508 aaPredicted RBP18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 SEPT5Q99719 369 aaPredicted RBP18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 HIPK3Q9H422 1215 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 ELAC1Q9H777 363 aaKnown RBP18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 EIF2B3Q9NR50 452 aaKnown RBP18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 PTTG2Q9NZH5 202 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 UBP1Q9NZI7 540 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 MPP6Q9NZW5 540 aa18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 PRPF19Q9UMS4 504 aaKnown RBP18.54■□□□□ 0.56
PDLIM3-201ENST00000284767 SYN3O14994 580 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 DCXO43602 365 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 STK10O94804 968 aaKnown RBP18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 MGAT1P26572 445 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 CD68P34810 354 aaPredicted RBP18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 GARSP41250 739 aaKnown RBP18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 RPL5P46777 297 aaKnown RBP18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 PPIDQ08752 370 aaKnown RBP18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 MRPL58Q14197 206 aaKnown RBP18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 ARHGEF6Q15052 776 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 NFE2Q16621 373 aaPredicted RBP18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 ARTNQ5T4W7 220 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 CES3Q6UWW8 571 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 TMCO2Q7Z6W1 182 aaPredicted RBP18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 ZNF784Q8NCA9 323 aaPredicted RBP18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 HIC2Q96JB3 615 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 PRICKLE1Q96MT3 831 aaPredicted RBP18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 TMEM216Q9P0N5 145 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 STK39Q9UEW8 545 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 DFFAO00273 331 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 PITPNM1O00562 1244 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 GALTP07902 379 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 CPA3P15088 417 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 CCR1P32246 355 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 NUMBP49757 651 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 KLF10Q13118 480 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 MGAT5BQ3V5L5 792 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 SERPINI1Q99574 410 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 CDH19Q9H159 772 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 PLK2Q9NYY3 685 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 RAB26Q9ULW5 256 aa18.53■□□□□ 0.56
PDLIM3-201ENST00000284767 ADAM12O43184 909 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 CCL5P13501 91 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 RPL17P18621 184 aaKnown RBP18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 TYK2P29597 1187 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 GALNT2Q10471 571 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 ARMC3Q5W041 872 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 ZNF280DQ6N043 979 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 CATSPER1Q8NEC5 780 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 DCUN1D1Q96GG9 259 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 ZNF419Q96HQ0 510 aaPredicted RBP18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 GCNAQ96QF7 691 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 APOL2Q9BQE5 337 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 COG4Q9H9E3 785 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 CAPN8A6NHC0 703 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 JCHAINP01591 159 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 FGFR3P22607 806 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 PRMT2P55345 433 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 TLR1Q15399 786 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 PDZD4Q76G19 769 aaPredicted RBP18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 LCA5Q86VQ0 697 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 NPAS4Q8IUM7 802 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 OR52K1Q8NGK4 314 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 FUBP3Q96I24 572 aaKnown RBP eCLIP18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 PRDM16Q9HAZ2 1276 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 TXNDC16Q9P2K2 825 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 PSAT1Q9Y617 370 aa18.52■□□□□ 0.56
PDLIM3-201ENST00000284767 MTMR11A4FU01 709 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 TMEM114B3SHH9 223 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 ZBTB14O43829 449 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 ASLP04424 464 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 F7P08709 466 aaPredicted RBP18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 COL6A1P12109 1028 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 GP5P40197 560 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 EFEMP1Q12805 493 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 DUSP4Q13115 394 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 RARS2Q5T160 578 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms