RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SLC38A7Q9NVC3 462 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 KLK14Q9P0G3 267 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 HCSTQ9UBK5 93 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 AAR2Q9Y312 384 aaKnown RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 INSL6Q9Y581 213 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 SYNJ2BP-COX16A0A087WUM0 186 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 GOLGA8QA0A0J9YX86 632 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 LOC100653049A0A140TA62 436 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 GOLGA8OA6NCC3 632 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 GOLGA8NF8WBI6 632 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 FAM72CH0Y354 149 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 AP1G1O43747 822 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 ZBTB14O43829 449 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 KRT34O76011 436 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 DDHD2O94830 711 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 LINC00271P0C7V0 271 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 SRGAP2BP0DMP2 458 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 CHRM1P11229 460 aaPredicted RBP13.08□□□□□ -0.32
C9orf3-201ENST00000277198 USP4Q13107 963 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 SLC12A1Q13621 1099 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 GRM2Q14416 872 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 SLC9B1Q4ZJI4 515 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 PAN2Q504Q3 1202 aaKnown RBP13.08□□□□□ -0.32
C9orf3-201ENST00000277198 FAM72AQ5TYM5 149 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 FAM72DQ6L9T8 149 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 ZFP1Q6P2D0 407 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 DCLRE1AQ6PJP8 1040 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 FAM72BQ86X60 149 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 CNTN4Q8IWV2 1026 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
C9orf3-201ENST00000277198 PTCD2Q8WV60 388 aaKnown RBP13.08□□□□□ -0.32
C9orf3-201ENST00000277198 IRGQQ8WZA9 623 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 LENG8Q96PV6 779 aaPredicted RBP13.08□□□□□ -0.32
C9orf3-201ENST00000277198 CENPKQ9BS16 269 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 ULBP1Q9BZM6 244 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 COX16Q9P0S2 106 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 TBC1D30Q9Y2I9 924 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 IPPQ9Y573 584 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 SQORQ9Y6N5 450 aa13.08□□□□□ -0.32
C9orf3-201ENST00000277198 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.07□□□□□ -0.32
C9orf3-201ENST00000277198 CLDN5O00501 218 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 NRP1O14786 923 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 TADA2AO75478 443 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 LTFP02788 710 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 HTR7P34969 479 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 SERPINB5P36952 375 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 CXCR3P49682 368 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 MAP3K7CLP57077 242 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 DSC3Q14574 896 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 SH2D4BQ5SQS7 431 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 WSCD1Q658N2 575 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 PM20D1Q6GTS8 502 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 RNF111Q6ZNA4 994 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 HFE2Q6ZVN8 426 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 BEND5Q7L4P6 421 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 ZC3HC1Q86WB0 502 aaKnown RBP13.07□□□□□ -0.32
C9orf3-201ENST00000277198 HPS6Q86YV9 775 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 TP53INP2Q8IXH6 220 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 SCML4Q8N228 414 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 TMEM151AQ8N4L1 468 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 KYQ8NBH2 561 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 RNF169Q8NCN4 708 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 STYXQ8WUJ0 223 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 PPP1R10Q96QC0 940 aaKnown RBP13.07□□□□□ -0.32
C9orf3-201ENST00000277198 GAS2L1Q99501 681 aaPredicted RBP13.07□□□□□ -0.32
C9orf3-201ENST00000277198 TRIM62Q9BVG3 475 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 C1QTNF1Q9BXJ1 281 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 RNF39Q9H2S5 420 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 CYP4F11Q9HBI6 524 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 MRM3Q9HC36 420 aaKnown RBP13.07□□□□□ -0.32
C9orf3-201ENST00000277198 ADAMTS6Q9UKP5 1117 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 PSMD13Q9UNM6 376 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 COL4A4P53420 1690 aaPredicted RBP13.07□□□□□ -0.32
C9orf3-201ENST00000277198 YJEFN3A6XGL0 299 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 E9PBE3 544 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 ATP9BO43861 1147 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 KLHL41O60662 606 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 USP12O75317 370 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 PDE5AO76074 875 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 UBTFL6P0CB48 400 aaPredicted RBP13.07□□□□□ -0.32
C9orf3-201ENST00000277198 NCAM1P13591 858 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 VCLP18206 1134 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 TFEBP19484 476 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 NFKB1P19838 968 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 PIK3R1P27986 724 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 PPARGP37231 505 aaPredicted RBP13.07□□□□□ -0.32
C9orf3-201ENST00000277198 ERVK-21P61565 698 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 SATB1Q01826 763 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 ZBTB17Q13105 803 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 RFTN1Q14699 578 aaPredicted RBP13.07□□□□□ -0.32
C9orf3-201ENST00000277198 C11orf91Q3C1V1 193 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 PCID2Q5JVF3 399 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 CERCAMQ5T4B2 595 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 OGFRL1Q5TC84 451 aaPredicted RBP13.07□□□□□ -0.32
C9orf3-201ENST00000277198 CWF19L1Q69YN2 538 aaKnown RBP13.07□□□□□ -0.32
C9orf3-201ENST00000277198 NPWQ8N729 165 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 SMG8Q8ND04 991 aaKnown RBP13.07□□□□□ -0.32
C9orf3-201ENST00000277198 CATSPER1Q8NEC5 780 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 ZSCAN18Q8TBC5 510 aaPredicted RBP13.07□□□□□ -0.32
C9orf3-201ENST00000277198 OSBPL2Q9H1P3 480 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms