RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 UGP2Q16851 508 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 ALG1LQ6GMV1 187 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 NEPROQ6NW34 567 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 SPATA31D4Q6ZUB0 917 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 OTOP2Q7RTS6 562 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 NECAB2Q7Z6G3 386 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 CLEC14AQ86T13 490 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 SETD3Q86TU7 594 aaPredicted RBP9.69□□□□□ -0.86
TRIM55-201ENST00000276573 ITIH5Q86UX2 942 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 HERC6Q8IVU3 1022 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 DENND6AQ8IWF6 608 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 BBS5Q8N3I7 341 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 C2CD4AQ8NCU7 369 aaPredicted RBP9.69□□□□□ -0.86
TRIM55-201ENST00000276573 ZFRQ96KR1 1074 aaKnown RBP9.69□□□□□ -0.86
TRIM55-201ENST00000276573 MYLK2Q9H1R3 596 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 ZNF395Q9H8N7 513 aaPredicted RBP9.69□□□□□ -0.86
TRIM55-201ENST00000276573 ECT2Q9H8V3 914 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 IL21Q9HBE4 155 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 ZNF334Q9HCZ1 680 aaPredicted RBP9.69□□□□□ -0.86
TRIM55-201ENST00000276573 IL23AQ9NPF7 189 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 THAP1Q9NVV9 213 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 STOML2Q9UJZ1 356 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 SLC39A10Q9ULF5 831 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 TBC1D30Q9Y2I9 924 aa9.69□□□□□ -0.86
TRIM55-201ENST00000276573 CCDC195A0A1B0GUA6 201 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 A0A1B0GVM2 712 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 E2F8A0AVK6 867 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 TCAF2A6NFQ2 919 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 MROH6A6NGR9 719 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 GJB3O75712 270 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 FGF18O76093 207 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 LATS1O95835 1130 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 RHOCP08134 193 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 ATXN1LP0C7T5 689 aaKnown RBP9.68□□□□□ -0.86
TRIM55-201ENST00000276573 CTSAP10619 480 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 FGF3P11487 239 aaPredicted RBP9.68□□□□□ -0.86
TRIM55-201ENST00000276573 NUMBP49757 651 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 NCALDP61601 193 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 SMAD3P84022 425 aaKnown RBP9.68□□□□□ -0.86
TRIM55-201ENST00000276573 MPP1Q00013 466 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 CDK18Q07002 472 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 USP10Q14694 798 aaKnown RBP9.68□□□□□ -0.86
TRIM55-201ENST00000276573 PCLAFQ15004 111 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 PABPC1LQ4VXU2 614 aaKnown RBP9.68□□□□□ -0.86
TRIM55-201ENST00000276573 MBLAC2Q68D91 279 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 C16orf59Q7L2K0 433 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 FEM1CQ96JP0 617 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 SLC22A12Q96S37 553 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 FAM167BQ9BTA0 163 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 ACE2Q9BYF1 805 aaPredicted RBP9.68□□□□□ -0.86
TRIM55-201ENST00000276573 C20orf27Q9GZN8 174 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 ZBP1Q9H171 429 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 SMPD4Q9NXE4 827 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 PCDH10Q9P2E7 1040 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 COPG2Q9UBF2 871 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 UBA2Q9UBT2 640 aaPredicted RBP9.68□□□□□ -0.86
TRIM55-201ENST00000276573 STK39Q9UEW8 545 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 SEPT3Q9UH03 358 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 FBXO5Q9UKT4 447 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 SSX2IPQ9Y2D8 614 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 ANKRD6Q9Y2G4 727 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 ASB3Q9Y575 518 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 ACTL7AQ9Y615 435 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 A0A0G2JND7 137 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 HAUS5O94927 633 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 CXCL14O95715 111 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 CNPP09543 421 aaKnown RBP9.68□□□□□ -0.86
TRIM55-201ENST00000276573 CPA3P15088 417 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 HDCP19113 662 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 HLA-DPA1P20036 260 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 GLDCP23378 1020 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 DNAJB1P25685 340 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 IRF9Q00978 393 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 CREMQ03060 361 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 RFTN1Q14699 578 aaPredicted RBP9.68□□□□□ -0.86
TRIM55-201ENST00000276573 CYTH1Q15438 398 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 RNF219Q5W0B1 726 aaPredicted RBP9.68□□□□□ -0.86
TRIM55-201ENST00000276573 TXNDC8Q6A555 127 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 LILRA6Q6PI73 481 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 ZCCHC23Q6ZST2 131 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 CRLF3Q8IUI8 442 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 C10orf107Q8IVU9 208 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 FIBCD1Q8N539 461 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 ARL14EPQ8N8R7 260 aaPredicted RBP9.68□□□□□ -0.86
TRIM55-201ENST00000276573 PPP1R14CQ8TAE6 165 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 ADAMTS19Q8TE59 1207 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 IFT43Q96FT9 208 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 PSKH2Q96QS6 385 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 MGME1Q9BQP7 344 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 TMEM120AQ9BXJ8 343 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 TRPC7Q9HCX4 862 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 HEY2Q9UBP5 337 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 TLK1Q9UKI8 766 aa9.68□□□□□ -0.86
TRIM55-201ENST00000276573 SLC7A4O43246 635 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 TGM5O43548 720 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 LDB2O43679 373 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 GREM1O60565 184 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 ATP5HO75947 161 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 SERPINE1P05121 402 aa9.67□□□□□ -0.86
TRIM55-201ENST00000276573 FGF1P05230 155 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms