RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 FXR1P51114 621 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRDM16-201ENST00000270722 TMEM17Q86X19 198 aa13.38□□□□□ -0.27
PRDM16-201ENST00000270722 A0A0A6YYK5 440 aaPredicted RBP13.37□□□□□ -0.27
PRDM16-201ENST00000270722 TPPPO94811 219 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 RAB4AP20338 218 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 FAUP35544 74 aaKnown RBP13.37□□□□□ -0.27
PRDM16-201ENST00000270722 C1QBPQ07021 282 aaKnown RBP13.37□□□□□ -0.27
PRDM16-201ENST00000270722 MTAPQ13126 283 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 AFTPHQ6ULP2 937 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 UTS2BQ765I0 119 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 CCDC54Q8NEL0 328 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 EEF1AKMT1Q8WVE0 214 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 LINC00854A0A1B0GVQ3 168 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 IFNGP01579 166 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 ARF5P84085 180 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 DDR1Q08345 913 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 SMTNL2Q2TAL5 461 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 CDC42EP5Q6NZY7 148 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 GLT6D1Q7Z4J2 308 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 KYQ8NBH2 561 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 PIGKQ92643 395 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 PLEKHG4BQ96PX9 1271 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 BTBD9Q96Q07 612 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 TRIM36Q9NQ86 728 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 ZMYM5Q9UJ78 669 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 MAGED1Q9Y5V3 778 aaPredicted RBP13.37□□□□□ -0.27
PRDM16-201ENST00000270722 REREQ9P2R6 1566 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 VILLO15195 856 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 PRODHO43272 600 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 RBMXL2O75526 392 aaKnown RBP13.37□□□□□ -0.27
PRDM16-201ENST00000270722 TCN1P20061 433 aaPredicted RBP13.37□□□□□ -0.27
PRDM16-201ENST00000270722 CAP2P40123 477 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 NDUFA9Q16795 377 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 SERPINA13PQ6UXR4 307 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 OR8H1Q8NGG4 311 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 METTL6Q8TCB7 284 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 PLEKHF1Q96S99 279 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 RERGLQ9H628 205 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 PCDH12Q9NPG4 1184 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 SNX13Q9Y5W8 968 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 NMT2O60551 498 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 SEC24AO95486 1093 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 CSN2P05814 226 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 RPL5P46777 297 aaKnown RBP13.37□□□□□ -0.27
PRDM16-201ENST00000270722 IQSEC1Q6DN90 963 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 SMIM15Q7Z3B0 74 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 RASAL3Q86YV0 1011 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 CERKQ8TCT0 537 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 C9orf72Q96LT7 481 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 RASSF1Q9NS23 344 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 QPCTLQ9NXS2 382 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 USP20Q9Y2K6 914 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 ALPPL2P10696 532 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 GIT2Q14161 759 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 GRTP1Q5TC63 336 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 ZNF605Q86T29 641 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 COL23A1Q86Y22 540 aaPredicted RBP13.37□□□□□ -0.27
PRDM16-201ENST00000270722 MREGQ8N565 214 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 TIFAQ96CG3 184 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 TMEM176AQ96HP8 235 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 SHOC2Q9UQ13 582 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 AIPO00170 330 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 RORAP35398 523 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 TTPAP49638 278 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 SPANXN3Q5MJ09 141 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 DEFB128Q7Z7B8 93 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 RAB43Q86YS6 212 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 C4orf33Q8N1A6 199 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 HDDC3Q8N4P3 179 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 ATG4CQ96DT6 458 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 PNMA5Q96PV4 448 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 TTYH1Q9H313 450 aaPredicted RBP13.37□□□□□ -0.27
PRDM16-201ENST00000270722 ALG13Q9NP73 1137 aaKnown RBP13.37□□□□□ -0.27
PRDM16-201ENST00000270722 ST3GAL5Q9UNP4 418 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 MYH7BA7E2Y1 1941 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 CAMSAP1Q5T5Y3 1602 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 A0A1B0GTH6 734 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 H3BQF6 201 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 SIN3BO75182 1162 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 FSHRP23945 695 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 TKTL1P51854 596 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 TDGQ13569 410 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 ZBTB6Q15916 424 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 SAMD4BQ5PRF9 694 aaKnown RBP13.37□□□□□ -0.27
PRDM16-201ENST00000270722 C9orf131Q5VYM1 1079 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 FAM92BQ6ZTR7 304 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 PTF1AQ7RTS3 328 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 REEP1Q9H902 201 aa13.37□□□□□ -0.27
PRDM16-201ENST00000270722 RGSL1A5PLK6 1076 aa13.36□□□□□ -0.27
PRDM16-201ENST00000270722 SLC26A3P40879 764 aa13.36□□□□□ -0.27
PRDM16-201ENST00000270722 ARID5BQ14865 1188 aa13.36□□□□□ -0.27
PRDM16-201ENST00000270722 ACOT1Q86TX2 421 aa13.36□□□□□ -0.27
PRDM16-201ENST00000270722 CLVS1Q8IUQ0 354 aaPredicted RBP13.36□□□□□ -0.27
PRDM16-201ENST00000270722 UBA3Q8TBC4 463 aa13.36□□□□□ -0.27
PRDM16-201ENST00000270722 ANKS1AQ92625 1134 aa13.36□□□□□ -0.27
PRDM16-201ENST00000270722 SP140LQ9H930 580 aa13.36□□□□□ -0.27
PRDM16-201ENST00000270722 ESYT3A0FGR9 886 aa13.36□□□□□ -0.27
PRDM16-201ENST00000270722 GSSP48637 474 aa13.36□□□□□ -0.27
PRDM16-201ENST00000270722 FRG1Q14331 258 aaKnown RBP13.36□□□□□ -0.27
PRDM16-201ENST00000270722 RASGRP2Q7LDG7 609 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms