RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 ARHGEF3Q9NR81 526 aa23.41■■□□□ 1.34
RAB40B-201ENST00000269347 SMPD4Q9NXE4 827 aa23.41■■□□□ 1.34
RAB40B-201ENST00000269347 NQO1P15559 274 aaKnown RBP23.4■■□□□ 1.34
RAB40B-201ENST00000269347 CORO1AP31146 461 aaKnown RBP23.4■■□□□ 1.34
RAB40B-201ENST00000269347 TNK2Q07912 1038 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 DLG1Q12959 904 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 STX3Q13277 289 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 PARP15Q460N3 678 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 RNF135Q8IUD6 432 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 ZNF398Q8TD17 642 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 KLHL29Q96CT2 875 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 ZFRQ96KR1 1074 aaKnown RBP23.4■■□□□ 1.34
RAB40B-201ENST00000269347 ARL8BQ9NVJ2 186 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 ZFP69BQ9UJL9 534 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 OR51F1A6NGY5 319 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 BUD23O43709 281 aaKnown RBP23.4■■□□□ 1.34
RAB40B-201ENST00000269347 DCTN3O75935 186 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 CLTBP09497 229 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 SLC35E2BP0CK96 405 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 TWF1Q12792 350 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 C1orf53Q5VUE5 145 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 C16orf59Q7L2K0 433 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 MAVSQ7Z434 540 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 LDB1Q86U70 411 aaPredicted RBP23.4■■□□□ 1.34
RAB40B-201ENST00000269347 OR6Y1Q8NGX8 325 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 PAWRQ96IZ0 340 aaKnown RBP23.4■■□□□ 1.34
RAB40B-201ENST00000269347 MYRFLQ96LU7 910 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 NACA2Q9H009 215 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 RHOJQ9H4E5 214 aa23.4■■□□□ 1.34
RAB40B-201ENST00000269347 CPSF2Q9P2I0 782 aaKnown RBP23.4■■□□□ 1.34
RAB40B-201ENST00000269347 AGO1Q9UL18 857 aaKnown RBP23.4■■□□□ 1.34
RAB40B-201ENST00000269347 PDE4DIPQ5VU43 2346 aa23.39■■□□□ 1.33
RAB40B-201ENST00000269347 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.39■■□□□ 1.33
RAB40B-201ENST00000269347 PIRTP0C851 137 aa23.39■■□□□ 1.33
RAB40B-201ENST00000269347 MAPKAPK2P49137 400 aa23.39■■□□□ 1.33
RAB40B-201ENST00000269347 WDR5P61964 334 aaKnown RBP23.39■■□□□ 1.33
RAB40B-201ENST00000269347 ITGA9Q13797 1035 aa23.39■■□□□ 1.33
RAB40B-201ENST00000269347 RBM20Q5T481 1227 aaKnown RBP23.39■■□□□ 1.33
RAB40B-201ENST00000269347 CNSTQ6PJW8 725 aa23.39■■□□□ 1.33
RAB40B-201ENST00000269347 CCDC117Q8IWD4 279 aaPredicted RBP23.39■■□□□ 1.33
RAB40B-201ENST00000269347 CENPLQ8N0S6 344 aaPredicted RBP23.39■■□□□ 1.33
RAB40B-201ENST00000269347 EXOC2Q96KP1 924 aa23.39■■□□□ 1.33
RAB40B-201ENST00000269347 ZNF558Q96NG5 402 aa23.39■■□□□ 1.33
RAB40B-201ENST00000269347 ARMCX1Q9P291 453 aa23.39■■□□□ 1.33
RAB40B-201ENST00000269347 ANKRD36A6QL64 1941 aa23.39■■□□□ 1.33
RAB40B-201ENST00000269347 TK2O00142 265 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 PARNO95453 639 aaKnown RBP23.38■■□□□ 1.33
RAB40B-201ENST00000269347 SERPINH1P50454 418 aaKnown RBP23.38■■□□□ 1.33
RAB40B-201ENST00000269347 SETDB1Q15047 1291 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 INSCQ1MX18 579 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 ICE2Q659A1 982 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 ATG16L1Q676U5 607 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 ZNF470Q6ECI4 717 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 ADAMTS19Q8TE59 1207 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 ZNF333Q96JL9 665 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 KLF16Q9BXK1 252 aaPredicted RBP23.38■■□□□ 1.33
RAB40B-201ENST00000269347 NMUR2Q9GZQ4 415 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 MRM3Q9HC36 420 aaKnown RBP23.38■■□□□ 1.33
RAB40B-201ENST00000269347 LOC285095A0A1B0GVY8 99 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 CCR10P46092 362 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 MNAT1P51948 309 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 GNA12Q03113 381 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 GALNT3Q14435 633 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 KCTD4Q8WVF5 259 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 TMEM169Q96HH4 297 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 PNPOQ9NVS9 261 aa23.38■■□□□ 1.33
RAB40B-201ENST00000269347 AP3B1O00203 1094 aa23.37■■□□□ 1.33
RAB40B-201ENST00000269347 TIMM44O43615 452 aa23.37■■□□□ 1.33
RAB40B-201ENST00000269347 BMP1P13497 986 aa23.37■■□□□ 1.33
RAB40B-201ENST00000269347 GLRBP48167 497 aa23.37■■□□□ 1.33
RAB40B-201ENST00000269347 SLC1A6P48664 564 aa23.37■■□□□ 1.33
RAB40B-201ENST00000269347 AQP5P55064 265 aa23.37■■□□□ 1.33
RAB40B-201ENST00000269347 BTG3Q14201 252 aaPredicted RBP23.37■■□□□ 1.33
RAB40B-201ENST00000269347 TSTD2Q5T7W7 516 aa23.37■■□□□ 1.33
RAB40B-201ENST00000269347 KIAA0930Q6ICG6 404 aaPredicted RBP23.37■■□□□ 1.33
RAB40B-201ENST00000269347 DNAJB7Q7Z6W7 309 aaPredicted RBP23.37■■□□□ 1.33
RAB40B-201ENST00000269347 PARP9Q8IXQ6 854 aa23.37■■□□□ 1.33
RAB40B-201ENST00000269347 C2CD4AQ8NCU7 369 aaPredicted RBP23.37■■□□□ 1.33
RAB40B-201ENST00000269347 SUDS3Q9H7L9 328 aaPredicted RBP23.37■■□□□ 1.33
RAB40B-201ENST00000269347 MARCH4Q9P2E8 410 aaPredicted RBP23.37■■□□□ 1.33
RAB40B-201ENST00000269347 SIN3BO75182 1162 aa23.37■■□□□ 1.33
RAB40B-201ENST00000269347 YBEYP58557 167 aaPredicted RBP23.37■■□□□ 1.33
RAB40B-201ENST00000269347 USP10Q14694 798 aaKnown RBP23.37■■□□□ 1.33
RAB40B-201ENST00000269347 NDNQ99608 321 aa23.37■■□□□ 1.33
RAB40B-201ENST00000269347 HERC2P3Q9BVR0 1158 aa23.37■■□□□ 1.33
RAB40B-201ENST00000269347 THAP1Q9NVV9 213 aa23.37■■□□□ 1.33
RAB40B-201ENST00000269347 TRPM5Q9NZQ8 1165 aa23.37■■□□□ 1.33
RAB40B-201ENST00000269347 DNAJC16Q9Y2G8 782 aa23.37■■□□□ 1.33
RAB40B-201ENST00000269347 LDB2O43679 373 aa23.36■■□□□ 1.33
RAB40B-201ENST00000269347 MGRN1O60291 552 aa23.36■■□□□ 1.33
RAB40B-201ENST00000269347 CPA3P15088 417 aa23.36■■□□□ 1.33
RAB40B-201ENST00000269347 HARS2P49590 506 aaKnown RBP23.36■■□□□ 1.33
RAB40B-201ENST00000269347 PTPRRQ15256 657 aa23.36■■□□□ 1.33
RAB40B-201ENST00000269347 FSCBQ5H9T9 825 aa23.36■■□□□ 1.33
RAB40B-201ENST00000269347 TMCO4Q5TGY1 634 aa23.36■■□□□ 1.33
RAB40B-201ENST00000269347 SPON2Q9BUD6 331 aa23.36■■□□□ 1.33
RAB40B-201ENST00000269347 VPS45Q9NRW7 570 aa23.36■■□□□ 1.33
RAB40B-201ENST00000269347 ARL5AQ9Y689 179 aa23.36■■□□□ 1.33
RAB40B-201ENST00000269347 FAM95CA0A1B0GW59 222 aa23.35■■□□□ 1.33
RAB40B-201ENST00000269347 MROH6A6NGR9 719 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms