RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 PRNPP04156 253 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 GABRG2P18507 467 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 WASP42768 502 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 RECQLP46063 649 aaPredicted RBP14.45□□□□□ -0.1
SSBP1-201ENST00000265304 NIPAL4Q0D2K0 466 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 LRRK1Q38SD2 2015 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 ANKRD20A2Q5SQ80 823 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 ANKRD20A1Q5TYW2 823 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 ANKRD20A3Q5VUR7 823 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 C4orf22Q6V702 233 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 PRPF39Q86UA1 669 aaKnown RBP14.45□□□□□ -0.1
SSBP1-201ENST00000265304 TMPRSS6Q8IU80 811 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 CHST14Q8NCH0 376 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 SPATA4Q8NEY3 305 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 MAGOHBQ96A72 148 aaKnown RBP14.45□□□□□ -0.1
SSBP1-201ENST00000265304 TMEM121Q9BTD3 319 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 AP1M1Q9BXS5 423 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 FAM126AQ9BYI3 521 aaPredicted RBP14.45□□□□□ -0.1
SSBP1-201ENST00000265304 TNKS2Q9H2K2 1166 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 L2HGDHQ9H9P8 463 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 NOD2Q9HC29 1040 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 NT5MQ9NPB1 228 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 VPS45Q9NRW7 570 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 SARDHQ9UL12 918 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 ZNF148Q9UQR1 794 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 PPIL1Q9Y3C6 166 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 SDK1Q7Z5N4 2213 aa14.45□□□□□ -0.1
SSBP1-201ENST00000265304 A0A1W2PQ67 120 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 APBB3O95704 486 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 ADH1BP00325 375 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 C5AR1P21730 350 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 SUOXP51687 545 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 GDF10P55107 478 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 RAD51Q06609 339 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 PARP6Q2NL67 630 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 TMEM31Q5JXX7 168 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 ATXN7L2Q5T6C5 722 aaPredicted RBP14.44□□□□□ -0.1
SSBP1-201ENST00000265304 FAM46CQ5VWP2 391 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 ZNF776Q68DI1 518 aaPredicted RBP14.44□□□□□ -0.1
SSBP1-201ENST00000265304 USP30Q70CQ3 517 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 B4GALNT4Q76KP1 1039 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 FAM71DQ8N9W8 422 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 RUNDC3BQ96NL0 473 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 PPP1R2P1Q96PQ5 205 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 SEMA3CQ99985 751 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 GORASP1Q9BQQ3 440 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 HDAC8Q9BY41 377 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 TM6SF2Q9BZW4 377 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 GBA3Q9H227 469 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 C10orf88Q9H8K7 445 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 ITM2CQ9NQX7 267 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 POLR3BQ9NW08 1133 aaPredicted RBP14.44□□□□□ -0.1
SSBP1-201ENST00000265304 USP36Q9P275 1121 aaKnown RBP14.44□□□□□ -0.1
SSBP1-201ENST00000265304 IL36AQ9UHA7 158 aa14.44□□□□□ -0.1
SSBP1-201ENST00000265304 CACNA1EQ15878 2313 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.43□□□□□ -0.1
SSBP1-201ENST00000265304 RNASEH1O60930 286 aaKnown RBP14.43□□□□□ -0.1
SSBP1-201ENST00000265304 URI1O94763 535 aaPredicted RBP14.43□□□□□ -0.1
SSBP1-201ENST00000265304 ALDH1A2O94788 518 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 STK10O94804 968 aaKnown RBP14.43□□□□□ -0.1
SSBP1-201ENST00000265304 NDUFV2P19404 249 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 ITGB7P26010 798 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 PI4KAP42356 2102 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 PTGIRP43119 386 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 KCNJ1P48048 391 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 SCNN1BP51168 640 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 RPL26P61254 145 aaKnown RBP14.43□□□□□ -0.1
SSBP1-201ENST00000265304 SKOR1P84550 965 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 CST6Q15828 149 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 ZNF805Q5CZA5 627 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 KCTD11Q693B1 232 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 ITPRIPL1Q6GPH6 555 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 CCDC137Q6PK04 289 aaKnown RBP14.43□□□□□ -0.1
SSBP1-201ENST00000265304 PID1Q7Z2X4 250 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 TSTD1Q8NFU3 115 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 PIP4K2CQ8TBX8 421 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 CAPZA3Q96KX2 299 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 AGAP3Q96P47 875 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 TRIB3Q96RU7 358 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 SUV39H2Q9H5I1 410 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 ATP13A3Q9H7F0 1226 aa14.43□□□□□ -0.1
SSBP1-201ENST00000265304 EVLQ9UI08 416 aaPredicted RBP14.43□□□□□ -0.1
SSBP1-201ENST00000265304 RPL26L1Q9UNX3 145 aaKnown RBP14.43□□□□□ -0.1
SSBP1-201ENST00000265304 ARIH1Q9Y4X5 557 aaPredicted RBP14.43□□□□□ -0.1
SSBP1-201ENST00000265304 LOC285095A0A1B0GVY8 99 aa14.42□□□□□ -0.1
SSBP1-201ENST00000265304 SLC7A4O43246 635 aa14.42□□□□□ -0.1
SSBP1-201ENST00000265304 LEFTY1O75610 366 aa14.42□□□□□ -0.1
SSBP1-201ENST00000265304 PRLP01236 227 aa14.42□□□□□ -0.1
SSBP1-201ENST00000265304 SERPINF2P08697 491 aa14.42□□□□□ -0.1
SSBP1-201ENST00000265304 SLC8A1P32418 973 aa14.42□□□□□ -0.1
SSBP1-201ENST00000265304 DRD3P35462 400 aa14.42□□□□□ -0.1
SSBP1-201ENST00000265304 MAGEA6P43360 314 aa14.42□□□□□ -0.1
SSBP1-201ENST00000265304 NRLP54845 237 aa14.42□□□□□ -0.1
SSBP1-201ENST00000265304 MAXP61244 160 aa14.42□□□□□ -0.1
SSBP1-201ENST00000265304 DSC2Q02487 901 aa14.42□□□□□ -0.1
SSBP1-201ENST00000265304 CKAP4Q07065 602 aaKnown RBP14.42□□□□□ -0.1
SSBP1-201ENST00000265304 SFSWAPQ12872 951 aaKnown RBP14.42□□□□□ -0.1
SSBP1-201ENST00000265304 SNX1Q13596 522 aa14.42□□□□□ -0.1
SSBP1-201ENST00000265304 ARSIQ5FYB1 569 aa14.42□□□□□ -0.1
SSBP1-201ENST00000265304 BRAT1Q6PJG6 821 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms