RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 SCNN1BP51168 640 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 FRG1Q14331 258 aaKnown RBP23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 DHCR24Q15392 516 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 SKIDA1Q1XH10 827 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 CTC1Q2NKJ3 1217 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 LRIT3Q3SXY7 679 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 FUT11Q495W5 492 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 PCID2Q5JVF3 399 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 ARMC3Q5W041 872 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 ADGRD1Q6QNK2 874 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 DCAKDQ8WVC6 231 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 SLC44A1Q8WWI5 657 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 TTC17Q96AE7 1141 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 ASIC4Q96FT7 647 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 FCRL3Q96P31 734 aaPredicted RBP23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 SLC2A11Q9BYW1 496 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 SCUBE2Q9NQ36 999 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 SMYD2Q9NRG4 433 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 GGA2Q9UJY4 613 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 FCF1Q9Y324 198 aaKnown RBP23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 MYLKQ15746 1914 aa23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 GYS2P54840 703 aa23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 CDK18Q07002 472 aa23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 SLC20A2Q08357 652 aa23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 MSLNQ13421 630 aaPredicted RBP23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 ANKRD20A4Q4UJ75 823 aa23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 ATAT1Q5SQI0 421 aa23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 EMC10Q5UCC4 262 aa23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 KIAA0907Q7Z7F0 614 aaPredicted RBP23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 SLC25A41Q8N5S1 370 aa23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 PTCD2Q8WV60 388 aaKnown RBP23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 TRIB3Q96RU7 358 aa23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 CHRAC1Q9NRG0 131 aa23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 TBK1Q9UHD2 729 aa23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 PDE4DIPQ5VU43 2346 aa23.15■■□□□ 1.3
SMARCB1-201ENST00000263121 MYO9BQ13459 2157 aa23.14■■□□□ 1.3
SMARCB1-201ENST00000263121 ZCWPW2A0A1B0GU75 182 aa23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 HEPACAM2A8MVW5 462 aa23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 CXorf49A8MYA2 514 aaPredicted RBP23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 K7ERQ8 282 aa23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 PABPC1P11940 636 aaKnown RBP23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 NR1D1P20393 614 aa23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 ATP5DP30049 168 aa23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 MSH2P43246 934 aa23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 RHOAP61586 193 aa23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 DLX2Q07687 328 aaPredicted RBP23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 TMED2Q15363 201 aa23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 SIRPB2Q5JXA9 342 aa23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 TRIM68Q6AZZ1 485 aa23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 ZNF449Q6P9G9 518 aa23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 CES3Q6UWW8 571 aa23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 METTL3Q86U44 580 aaKnown RBP23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 ZNF669Q96BR6 464 aaPredicted RBP23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 MRRFQ96E11 262 aaKnown RBP23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 MRM3Q9HC36 420 aaKnown RBP23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 FBXO10Q9UK96 956 aa23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 FAM169AQ9Y6X4 670 aa23.14■■□□□ 1.29
SMARCB1-201ENST00000263121 HOXC11O43248 304 aaPredicted RBP23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 SMAD6O43541 496 aaKnown RBP23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 HLA-DPA1P20036 260 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 DMC1Q14565 340 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 POU6F1Q14863 301 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 RALGPS1Q5JS13 557 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 CES5AQ6NT32 575 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 PKN3Q6P5Z2 889 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 NCEH1Q6PIU2 408 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 LRRC6Q86X45 466 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 RNF135Q8IUD6 432 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 UNC5BQ8IZJ1 945 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 IFT43Q96FT9 208 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 RANBP9Q96S59 729 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 TTYH1Q9H313 450 aaPredicted RBP23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 PRKAG3Q9UGI9 489 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 TCAF1Q9Y4C2 921 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 MTCH2Q9Y6C9 303 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 REV3LO60673 3130 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 TMEM265A0A087WTH1 108 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 ADH1CP00326 375 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 ADH5P11766 374 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 KDM7AQ6ZMT4 941 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 EXOC3L1Q86VI1 746 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 PPM1NQ8N819 430 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 PPHLN1Q8NEY8 458 aaKnown RBP23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 MFSD3Q96ES6 412 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 HS3ST2Q9Y278 367 aa23.13■■□□□ 1.29
SMARCB1-201ENST00000263121 NDST3O95803 873 aa23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 FGF1P05230 155 aa23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 ADRA1DP25100 572 aa23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 NMBRP28336 390 aa23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 CTSOP43234 321 aaPredicted RBP23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 COL19A1Q14993 1142 aa23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 TANGO2Q6ICL3 276 aa23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 ADIPOR2Q86V24 386 aa23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 SLC26A11Q86WA9 606 aa23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 CTAGE3PQ8IX95 158 aa23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 CERS2Q96G23 380 aa23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 ZNF778Q96MU6 729 aa23.12■■□□□ 1.29
SMARCB1-201ENST00000263121 MYADMQ96S97 322 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms