RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 MMP14P50281 582 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 CCNIQ14094 377 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 MIIPQ5JXC2 388 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 R3HCC1LQ7Z5L2 792 aaKnown RBP12.2□□□□□ -0.46
COL8A1-201ENST00000261037 BPIFB6Q8NFQ5 453 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 REXO5Q96IC2 774 aaKnown RBP12.2□□□□□ -0.46
COL8A1-201ENST00000261037 LGMNQ99538 433 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 AGXT2Q9BYV1 514 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 CDT1Q9H211 546 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 RXRGP48443 463 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 PIK3CGP48736 1102 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 NOMO2Q5JPE7 1267 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 PIGZQ86VD9 579 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 OR10G6Q8NH81 332 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 STAG3L4Q8TBR4 150 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 HAS1Q92839 578 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 SEMA3CQ99985 751 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 EXO5Q9H790 373 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 ADCY6O43306 1168 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 EVX2Q03828 476 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 EXOC3L1Q86VI1 746 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 DSELQ8IZU8 1212 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 OR5B17Q8NGF7 314 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 MOSPD2Q8NHP6 518 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 CXorf40BQ96DE9 158 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 CDH9Q9ULB4 789 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 IQCMA0A1B0GVH7 501 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 ASNA1O43681 348 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 GMFGO60234 142 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 LYPLA1O75608 230 aaPredicted RBP12.2□□□□□ -0.46
COL8A1-201ENST00000261037 ANXA6P08133 673 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 TFEBP19484 476 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 EIF2B2P49770 351 aaKnown RBP12.2□□□□□ -0.46
COL8A1-201ENST00000261037 CTBP1Q13363 440 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 MSLNQ13421 630 aaPredicted RBP12.2□□□□□ -0.46
COL8A1-201ENST00000261037 DGUOKQ16854 277 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 ALKBH2Q6NS38 261 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 GPR142Q7Z601 462 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 ASB2Q96Q27 587 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 KCNK4Q9NYG8 393 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 SALL3Q9BXA9 1300 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 A0A088AWK7 358 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 GSAPA4D1B5 854 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 MAFO75444 373 aaPredicted RBP12.2□□□□□ -0.46
COL8A1-201ENST00000261037 ZNF10P21506 573 aaPredicted RBP12.2□□□□□ -0.46
COL8A1-201ENST00000261037 FAM151BQ6UXP7 276 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 SERPINA13PQ6UXR4 307 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 BTN2A1Q7KYR7 527 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 EIF3MQ7L2H7 374 aaKnown RBP12.2□□□□□ -0.46
COL8A1-201ENST00000261037 CDYL2Q8N8U2 506 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 CENPIQ92674 756 aaPredicted RBP12.2□□□□□ -0.46
COL8A1-201ENST00000261037 TEKT5Q96M29 485 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 C2orf49Q9BVC5 232 aaPredicted RBP12.2□□□□□ -0.46
COL8A1-201ENST00000261037 DIABLOQ9NR28 239 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 TNFSF13BQ9Y275 285 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 H0Y858 1186 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 ACSL4O60488 711 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 ATP4AP20648 1035 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 NAGLUP54802 743 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 SQLEQ14534 574 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 MEA1Q16626 185 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 CRTC3Q6UUV7 619 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 AGMOQ6ZNB7 445 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 TSHZ1Q6ZSZ6 1077 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 USP50Q70EL3 339 aaPredicted RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 TTC7BQ86TV6 843 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 ARMC8Q8IUR7 673 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 C8orf59Q8N0T1 100 aaPredicted RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 ZNF655Q8N720 491 aaPredicted RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 TMEM161BQ8NDZ6 487 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 C18orf25Q96B23 403 aaPredicted RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 LRRC39Q96DD0 335 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 S100A13Q99584 98 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 CAB39LQ9H9S4 337 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 MEIS2O14770 477 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 MED26O95402 600 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 CATP04040 527 aaKnown RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 COX4I1P13073 169 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 JAK1P23458 1154 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 AKIRIN2Q53H80 203 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 APLFQ8IW19 511 aaPredicted RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 TNS4Q8IZW8 715 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 CFAP52Q8N1V2 620 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 OR52K2Q8NGK3 314 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 STARD8Q92502 1023 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 TRIT1Q9H3H1 467 aaKnown RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 ATP13A3Q9H7F0 1226 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 AASDHPPTQ9NRN7 309 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 COQ6Q9Y2Z9 468 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 TNPO3Q9Y5L0 923 aaKnown RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 SF3B1O75533 1304 aaKnown RBP eCLIP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 UBR1Q8IWV7 1749 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 YDJCA8MPS7 323 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 CD3EAPO15446 510 aaKnown RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 OR10H2O60403 315 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 HIST1H2ABP04908 130 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 SRP54P61011 504 aaKnown RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 COPZ1P61923 177 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 LSM3P62310 102 aaKnown RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 MTAPQ13126 283 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms